← Back to search
8b9t

Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide

Method: X-RAY DIFFRACTION
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Protein scribble homolog

Homo sapiens

UniProt Q14160

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 Protein E6 × 1 （A0A384KQK8） SODIUM ION × 1 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID × 4 ISOPROPYL ALCOHOL × 1 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
1uju 1wha 1x5q 2w4f 4wyt 5vwc 6eey 6esp 6myf

9 assemblies

Homodimer
7jo7 7jo7 7qsb

3 assemblies

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
4wyu 4wyu 5vwi 5vwi 5vwi 5vwk 5vwk 5vwk 5vwk 6ms1 6ms1 6mtu

47 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name SCRIB_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 6–96； UniProt 1002–1092

Protein E6

OrganismNot specified

UniProt A0A384KQK8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 Protein scribble homolog × 1 （Q14160） SODIUM ION × 1 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID × 4 ISOPROPYL ALCOHOL × 1 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
8b87 8b9t

2 assemblies

View Construct and Data Evidence
UniProt name A0A384KQK8_HPV16
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B； PDBConstruct 1–10； UniProt 149–158

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id8b9t
Deposition date deposition_date2022-10-07
Structure title titleCrystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Keywords keywordsScribble, human papillomavirus, E6, PDZ domain, cell polarity, PROTEIN BINDING; PROTEIN BINDING
Experimental Method methodX-RAY DIFFRACTION
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8b9t__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8b9t__assembly_1__model_1 | I(q)

10-2 10-1 105 106 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8b9t__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）14.59 Å
Rg (electron density)13.22 Å
Total Rg14.67 Å
Atom count1631
Residues98
Excluded volume14309 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8b9t__assembly_1__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (6)

▶

7. Citations (1)