8y6q

Structure of the Dark/Dronc complex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Apaf-1 related killer DARK

Drosophila melanogaster

UniProt Q7KLI1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Caspase Dronc × 8 (Q9XYF4) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q7KLI1_DROME
Isoform —
PDB entities 1
Chains and sequence ranges Author chain H; PDBConstruct 1–1237; UniProt 10–1246 Author chain I; PDBConstruct 1–1237; UniProt 10–1246 Author chain J; PDBConstruct 1–1237; UniProt 10–1246 Author chain K; PDBConstruct 1–1237; UniProt 10–1246 Author chain L; PDBConstruct 1–1237; UniProt 10–1246 Author chain M; PDBConstruct 1–1237; UniProt 10–1246 Author chain O; PDBConstruct 1–1237; UniProt 10–1246 Author chain Q; PDBConstruct 1–1237; UniProt 10–1246

Caspase Dronc

Drosophila melanogaster

UniProt Q9XYF4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 16 Apaf-1 related killer DARK × 8 (Q7KLI1) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DRONC_DROME
Isoform —
PDB entities 2
Chains and sequence ranges Author chain A; PDBConstruct 1–102; UniProt 10–111 Author chain B; PDBConstruct 1–102; UniProt 10–111 Author chain C; PDBConstruct 1–102; UniProt 10–111 Author chain D; PDBConstruct 1–102; UniProt 10–111 Author chain E; PDBConstruct 1–102; UniProt 10–111 Author chain F; PDBConstruct 1–102; UniProt 10–111 Author chain G; PDBConstruct 1–102; UniProt 10–111 Author chain N; PDBConstruct 1–102; UniProt 10–111

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8y6q
Deposition date deposition_date2024-02-03
Last revision last_revision2024-08-07
Structure title titleStructure of the Dark/Dronc complex
Keywords keywordsDark, Dronc, apoptosis, cryo-EM; APOPTOSIS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8y6q__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8y6q__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8y6q__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)96.08 Å
Rg (electron density)96.12 Å
Total Rg96.13 Å
Atom count75726
Residues9362
Excluded volume1358600 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8y6q__assembly_1__model_1 hexadecameric (16) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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7. Citations (1)