9d2f

3D structure and atomic model of RS3 of mouse respiratory cilia

Method: ELECTRON MICROSCOPY Dmax: 323.3 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

Adenylate kinase 9

OrganismNot specified

UniProt G3UYQ4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain A; UniProt 1–1894 Not recorded Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name KAD9_MOUSE
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–1894; UniProt 1–1894

Leucine-rich repeat-containing protein 23

OrganismNot specified

UniProt O35125

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain B; UniProt 1–340 Chain C; UniProt 1–340 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name LRC23_MOUSE
Isoform
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–340; UniProt 1–340 Author chain C; PDBConstruct 1–340; UniProt 1–340

Serine/threonine/tyrosine interacting-like 1

OrganismNot specified

UniProt Q9DAR2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain H; UniProt 1–321 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name Q9DAR2_MOUSE
Isoform
PDB entities 3
Chains and sequence ranges Author chain H; PDBConstruct 1–321; UniProt 1–321

Cilia- and flagella-associated protein 91

OrganismNot specified

UniProt Q8BRC6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain N; UniProt 1–783 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CFA91_MOUSE
Isoform
PDB entities 4
Chains and sequence ranges Author chain N; PDBConstruct 1–783; UniProt 1–783

Actin, aortic smooth muscle

OrganismNot specified

UniProt P62737

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain O; UniProt 1–377 Chain R; UniProt 1–377 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name ACTA_MOUSE
Isoform
PDB entities 5
Chains and sequence ranges Author chain O; PDBConstruct 1–377; UniProt 1–377 Author chain R; PDBConstruct 1–377; UniProt 1–377

Axonemal dynein light intermediate polypeptide 1

OrganismNot specified

UniProt Q8BVN8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain P; UniProt 1–258 Chain Q; UniProt 1–258 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name IDLC_MOUSE
Isoform
PDB entities 6
Chains and sequence ranges Author chain P; PDBConstruct 1–258; UniProt 1–258 Author chain Q; PDBConstruct 1–258; UniProt 1–258

Centrin-2

OrganismNot specified

UniProt Q9R1K9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain S; UniProt 1–172 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CETN2_MOUSE
Isoform
PDB entities 7
Chains and sequence ranges Author chain S; PDBConstruct 1–172; UniProt 1–172

Dynein axonemal heavy chain 1

OrganismNot specified

UniProt E9Q8T7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain U; UniProt 1–4250 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name DYH1_MOUSE
Isoform
PDB entities 8
Chains and sequence ranges Author chain U; PDBConstruct 1–4250; UniProt 1–4250

Cilia- and flagella-associated protein 57

OrganismNot specified

UniProt Q9D180

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain W; UniProt 1–1249 Chain X; UniProt 1–1249 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CFA57_MOUSE
Isoform
PDB entities 9
Chains and sequence ranges Author chain W; PDBConstruct 1–1249; UniProt 1–1249 Author chain X; PDBConstruct 1–1249; UniProt 1–1249

Cilia- and flagella-associated protein 43

OrganismNot specified

UniProt E9Q7R9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain Y; UniProt 1–1682 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CFA43_MOUSE
Isoform
PDB entities 10
Chains and sequence ranges Author chain Y; PDBConstruct 1–1682; UniProt 1–1682

Cilia- and flagella-associated protein 44

OrganismNot specified

UniProt E9Q5M6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain Z; UniProt 1–1843 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CFA44_MOUSE
Isoform
PDB entities 11
Chains and sequence ranges Author chain Z; PDBConstruct 1–1843; UniProt 1–1843

Dynein, axonemal, heavy chain 6

OrganismNot specified

UniProt E9Q0B6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain T; UniProt 1–4144 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name E9Q0B6_MOUSE
Isoform
PDB entities 12
Chains and sequence ranges Author chain T; PDBConstruct 1–4144; UniProt 1–4144

MORN repeat-containing protein 5

OrganismNot specified

UniProt Q9DAI9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain I; UniProt 1–170 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name MORN5_MOUSE
Isoform
PDB entities 13
Chains and sequence ranges Author chain I; PDBConstruct 1–170; UniProt 1–170

Cilia- and flagella-associated protein 61

OrganismNot specified

UniProt Q8CEL2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain J; UniProt 1–1252 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CFA61_MOUSE
Isoform
PDB entities 14
Chains and sequence ranges Author chain J; PDBConstruct 1–1252; UniProt 1–1252

Cilia- and flagella-associated protein 251

OrganismNot specified

UniProt E9Q743

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain K; UniProt 1–1299 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CF251_MOUSE
Isoform
PDB entities 15
Chains and sequence ranges Author chain K; PDBConstruct 1–1299; UniProt 1–1299

Tetratricopeptide repeat protein 29

OrganismNot specified

UniProt E9QLU4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain L; UniProt 1–471 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name E9QLU4_MOUSE
Isoform
PDB entities 16
Chains and sequence ranges Author chain L; PDBConstruct 1–471; UniProt 1–471

Zinc finger, MYND domain containing 12

OrganismNot specified

UniProt A2BGJ5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain M; UniProt 1–363 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name A2BGJ5_MOUSE
Isoform
PDB entities 17
Chains and sequence ranges Author chain M; PDBConstruct 1–363; UniProt 1–363

Malate dehydrogenase, cytoplasmic

OrganismNot specified

UniProt P14152

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain E; UniProt 1–334 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name MDHC_MOUSE
Isoform
PDB entities 18
Chains and sequence ranges Author chain E; PDBConstruct 1–334; UniProt 1–334

Putative malate dehydrogenase 1B

OrganismNot specified

UniProt Q5F204

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain F; UniProt 1–500 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name MDH1B_MOUSE
Isoform
PDB entities 19
Chains and sequence ranges Author chain F; PDBConstruct 1–500; UniProt 1–500

UPF0728 protein C10orf53 homolog

OrganismNot specified

UniProt Q3KNL4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain V; UniProt 1–93 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CJ053_MOUSE
Isoform
PDB entities 20
Chains and sequence ranges Author chain V; PDBConstruct 1–93; UniProt 1–93

A kinase (PRKA) anchor protein 14

OrganismNot specified

UniProt Q3V0I7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain a; UniProt 1–536 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name Q3V0I7_MOUSE
Isoform
PDB entities 21
Chains and sequence ranges Author chain a; PDBConstruct 1–536; UniProt 1–536

cAMP-dependent protein kinase type II-alpha regulatory subunit

OrganismNot specified

UniProt P12367

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain b; UniProt 1–401 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

3 other PDB entries and 3 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name KAP2_MOUSE
Isoform
PDB entities 22
Chains and sequence ranges Author chain b; PDBConstruct 1–401; UniProt 1–401

Ciliogenesis-associated TTC17-interacting protein

OrganismNot specified

UniProt B9EKE5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain c; UniProt 1–520 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Adenylate kinase 7 × 2 (F8WIC0) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name CATIP_MOUSE
Isoform
PDB entities 23
Chains and sequence ranges Author chain c; PDBConstruct 1–520; UniProt 1–520

Adenylate kinase 7

OrganismNot specified

UniProt F8WIC0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 29 PDB declaration: 29-meric(29) Consistent with protein copy count Chain D; UniProt 1–723 Chain G; UniProt 1–723 Not recorded Adenylate kinase 9 × 1 (G3UYQ4) Leucine-rich repeat-containing protein 23 × 2 (O35125) Serine/threonine/tyrosine interacting-like 1 × 1 (Q9DAR2) Cilia- and flagella-associated protein 91 × 1 (Q8BRC6) Actin, aortic smooth muscle × 2 (P62737) Axonemal dynein light intermediate polypeptide 1 × 2 (Q8BVN8) Centrin-2 × 1 (Q9R1K9) Dynein axonemal heavy chain 1 × 1 (E9Q8T7) Cilia- and flagella-associated protein 57 × 2 (Q9D180) Cilia- and flagella-associated protein 43 × 1 (E9Q7R9) Cilia- and flagella-associated protein 44 × 1 (E9Q5M6) Dynein, axonemal, heavy chain 6 × 1 (E9Q0B6) MORN repeat-containing protein 5 × 1 (Q9DAI9) Cilia- and flagella-associated protein 61 × 1 (Q8CEL2) Cilia- and flagella-associated protein 251 × 1 (E9Q743) Tetratricopeptide repeat protein 29 × 1 (E9QLU4) Zinc finger, MYND domain containing 12 × 1 (A2BGJ5) Malate dehydrogenase, cytoplasmic × 1 (P14152) Putative malate dehydrogenase 1B × 1 (Q5F204) UPF0728 protein C10orf53 homolog × 1 (Q3KNL4) A kinase (PRKA) anchor protein 14 × 1 (Q3V0I7) cAMP-dependent protein kinase type II-alpha regulatory subunit × 1 (P12367) Ciliogenesis-associated TTC17-interacting protein × 1 (B9EKE5) ZN ZINC ION × 2 ELECTRON MICROSCOPY cryo-EM buffer:pH 7.4;30 mM HEPES pH 7.4, 25 mM KCl, 5 mM MgSO4, 1 mM EGTA, 0.1 mM EDTA cryo-EM vitrification conditions:Cryogen ETHANE;4 microliters of splayed axoneme sample were applied to glow-discharged Quantifoil R2/2 Cu grids. After removing excess liquid by blotting the grid from the backside with Whatman filter paper for 2-3 s, the grid was immediately plunge-frozen in liquid ethane using a home-made plunge freezer. Resolution 4.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name F8WIC0_MOUSE
Isoform
PDB entities 24
Chains and sequence ranges Author chain D; PDBConstruct 1–723; UniProt 1–723 Author chain G; PDBConstruct 1–723; UniProt 1–723

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 9d2f

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 9d2f
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2. Structure Basics 2. Structure Basics

Entry ID entry_id9d2f
Deposition date deposition_date2024-08-08
Structure title title3D structure and atomic model of RS3 of mouse respiratory cilia
Keywords keywordsaxoneme, radial spoke, STRUCTURAL PROTEIN; STRUCTURAL PROTEIN
Experimental Method methodELECTRON MICROSCOPY

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier
Radius of gyration Rg (electron density) rg_electron161.90
Forward intensity I(0) i022762900000.00
Molecular weight molecular_weight1310600.0 kDa
Excluded volume excluded_volume1647300 ų
Envelope volume envelope_volume4513900 ų
Hydration-shell volume shell_volume238010 ų
Envelope diameter envelope_diameter499.7
Shell Rg shell_rg117.20
Envelope Rg envelope_rg153.00
Shape Rg shape_rg161.90
Total Rg total_rg161.80
Total atoms total_atoms184242
Residues n_residues11386
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax323.3
Rg (real space) rg_real113.60
Rg uncertainty (real space) rg_real_error1.55
I(0) (real space) i0_real1.6940e+10
I(0) uncertainty (real space) i0_real_error3.9970e+08
Rg (reciprocal space) rg_reciprocal110.40
I(0) (reciprocal space) i0_reciprocal18880000000.0000
Solution quality estimate total_estimate0.8110
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary107.8
Skewness Skewness skewness0.374
Kurtosis Kurtosis kurtosis-0.761
Angular range angular_range— – 0.0450 −1
Current regularization parameter α current_alpha3.4540
Highest regularization parameter α highest_alpha655900000.0000
Real-space data points n_real_points10
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.104; Oscil: 0.993; Stabil: 0.861; Sysdev: 1.000; Positv: 1.000; Valcen: 0.973; Smooth: 0.007

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (25)

8. Citations (1)

9. Files and Curves (10)