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9dog

Octahedral small virus-like particles of dengue virus type 2 (octahedral reconstruction)

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

glycoprotein E

dengue virus type 2

UniProt G3GAJ4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 144 Protein prM × 72 （P14340） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
9dof 9dog

2 assemblies

View Construct and Data Evidence
UniProt name G3GAJ4_9FLAV
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A000； PDBConstruct 1–495； UniProt 1–495 Author chain A001； PDBConstruct 1–495； UniProt 1–495 Author chain A002； PDBConstruct 1–495； UniProt 1–495 Author chain A003； PDBConstruct 1–495； UniProt 1–495 Author chain A004； PDBConstruct 1–495； UniProt 1–495 Author chain A005； PDBConstruct 1–495； UniProt 1–495 Author chain A006； PDBConstruct 1–495； UniProt 1–495 Author chain A007； PDBConstruct 1–495； UniProt 1–495 Author chain A008； PDBConstruct 1–495； UniProt 1–495 Author chain A009； PDBConstruct 1–495； UniProt 1–495 Author chain A010； PDBConstruct 1–495； UniProt 1–495 Author chain A011； PDBConstruct 1–495； UniProt 1–495 Author chain A012； PDBConstruct 1–495； UniProt 1–495 Author chain A013； PDBConstruct 1–495； UniProt 1–495 Author chain A014； PDBConstruct 1–495； UniProt 1–495 Author chain A015； PDBConstruct 1–495； UniProt 1–495 Author chain A016； PDBConstruct 1–495； UniProt 1–495 Author chain A017； PDBConstruct 1–495； UniProt 1–495 Author chain A018； PDBConstruct 1–495； UniProt 1–495 Author chain A019； PDBConstruct 1–495； UniProt 1–495 Author chain A020； PDBConstruct 1–495； UniProt 1–495 Author chain A021； PDBConstruct 1–495； UniProt 1–495 Author chain A022； PDBConstruct 1–495； UniProt 1–495 Author chain A023； PDBConstruct 1–495； UniProt 1–495 Author chain B000； PDBConstruct 1–495； UniProt 1–495 Author chain B001； PDBConstruct 1–495； UniProt 1–495 Author chain B002； PDBConstruct 1–495； UniProt 1–495 Author chain B003； PDBConstruct 1–495； UniProt 1–495 Author chain B004； PDBConstruct 1–495； UniProt 1–495 Author chain B005； PDBConstruct 1–495； UniProt 1–495 Author chain B006； PDBConstruct 1–495； UniProt 1–495 Author chain B007； PDBConstruct 1–495； UniProt 1–495 Author chain B008； PDBConstruct 1–495； UniProt 1–495 Author chain B009； PDBConstruct 1–495； UniProt 1–495 Author chain B010； PDBConstruct 1–495； UniProt 1–495 Author chain B011； PDBConstruct 1–495； UniProt 1–495 Author chain B012； PDBConstruct 1–495； UniProt 1–495 Author chain B013； PDBConstruct 1–495； UniProt 1–495 Author chain B014； PDBConstruct 1–495； UniProt 1–495 Author chain B015； PDBConstruct 1–495； UniProt 1–495 Author chain B016； PDBConstruct 1–495； UniProt 1–495 Author chain B017； PDBConstruct 1–495； UniProt 1–495 Author chain B018； PDBConstruct 1–495； UniProt 1–495 Author chain B019； PDBConstruct 1–495； UniProt 1–495 Author chain B020； PDBConstruct 1–495； UniProt 1–495 Author chain B021； PDBConstruct 1–495； UniProt 1–495 Author chain B022； PDBConstruct 1–495； UniProt 1–495 Author chain B023； PDBConstruct 1–495； UniProt 1–495 Author chain C000； PDBConstruct 1–495； UniProt 1–495 Author chain C001； PDBConstruct 1–495； UniProt 1–495 Author chain C002； PDBConstruct 1–495； UniProt 1–495 Author chain C003； PDBConstruct 1–495； UniProt 1–495 Author chain C004； PDBConstruct 1–495； UniProt 1–495 Author chain C005； PDBConstruct 1–495； UniProt 1–495 Author chain C006； PDBConstruct 1–495； UniProt 1–495 Author chain C007； PDBConstruct 1–495； UniProt 1–495 Author chain C008； PDBConstruct 1–495； UniProt 1–495 Author chain C009； PDBConstruct 1–495； UniProt 1–495 Author chain C010； PDBConstruct 1–495； UniProt 1–495 Author chain C011； PDBConstruct 1–495； UniProt 1–495 Author chain C012； PDBConstruct 1–495； UniProt 1–495 Author chain C013； PDBConstruct 1–495； UniProt 1–495 Author chain C014； PDBConstruct 1–495； UniProt 1–495 Author chain C015； PDBConstruct 1–495； UniProt 1–495 Author chain C016； PDBConstruct 1–495； UniProt 1–495 Author chain C017； PDBConstruct 1–495； UniProt 1–495 Author chain C018； PDBConstruct 1–495； UniProt 1–495 Author chain C019； PDBConstruct 1–495； UniProt 1–495 Author chain C020； PDBConstruct 1–495； UniProt 1–495 Author chain C021； PDBConstruct 1–495； UniProt 1–495 Author chain C022； PDBConstruct 1–495； UniProt 1–495 Author chain C023； PDBConstruct 1–495； UniProt 1–495

Protein prM

dengue virus type 2

UniProt P14340

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 144 glycoprotein E × 72 （G3GAJ4） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
2r29 3j27 3j27 3j27 3j27 3j27 3j2p 4uih 6fla 6flb 6flc 6flc

36 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name POLG_DEN2N
Isoform —
PDB entities 2
Chains and sequence ranges Author chain D000； PDBConstruct 1–166； UniProt 115–280 Author chain D001； PDBConstruct 1–166； UniProt 115–280 Author chain D002； PDBConstruct 1–166； UniProt 115–280 Author chain D003； PDBConstruct 1–166； UniProt 115–280 Author chain D004； PDBConstruct 1–166； UniProt 115–280 Author chain D005； PDBConstruct 1–166； UniProt 115–280 Author chain D006； PDBConstruct 1–166； UniProt 115–280 Author chain D007； PDBConstruct 1–166； UniProt 115–280 Author chain D008； PDBConstruct 1–166； UniProt 115–280 Author chain D009； PDBConstruct 1–166； UniProt 115–280 Author chain D010； PDBConstruct 1–166； UniProt 115–280 Author chain D011； PDBConstruct 1–166； UniProt 115–280 Author chain D012； PDBConstruct 1–166； UniProt 115–280 Author chain D013； PDBConstruct 1–166； UniProt 115–280 Author chain D014； PDBConstruct 1–166； UniProt 115–280 Author chain D015； PDBConstruct 1–166； UniProt 115–280 Author chain D016； PDBConstruct 1–166； UniProt 115–280 Author chain D017； PDBConstruct 1–166； UniProt 115–280 Author chain D018； PDBConstruct 1–166； UniProt 115–280 Author chain D019； PDBConstruct 1–166； UniProt 115–280 Author chain D020； PDBConstruct 1–166； UniProt 115–280 Author chain D021； PDBConstruct 1–166； UniProt 115–280 Author chain D022； PDBConstruct 1–166； UniProt 115–280 Author chain D023； PDBConstruct 1–166； UniProt 115–280 Author chain E000； PDBConstruct 1–166； UniProt 115–280 Author chain E001； PDBConstruct 1–166； UniProt 115–280 Author chain E002； PDBConstruct 1–166； UniProt 115–280 Author chain E003； PDBConstruct 1–166； UniProt 115–280 Author chain E004； PDBConstruct 1–166； UniProt 115–280 Author chain E005； PDBConstruct 1–166； UniProt 115–280 Author chain E006； PDBConstruct 1–166； UniProt 115–280 Author chain E007； PDBConstruct 1–166； UniProt 115–280 Author chain E008； PDBConstruct 1–166； UniProt 115–280 Author chain E009； PDBConstruct 1–166； UniProt 115–280 Author chain E010； PDBConstruct 1–166； UniProt 115–280 Author chain E011； PDBConstruct 1–166； UniProt 115–280 Author chain E012； PDBConstruct 1–166； UniProt 115–280 Author chain E013； PDBConstruct 1–166； UniProt 115–280 Author chain E014； PDBConstruct 1–166； UniProt 115–280 Author chain E015； PDBConstruct 1–166； UniProt 115–280 Author chain E016； PDBConstruct 1–166； UniProt 115–280 Author chain E017； PDBConstruct 1–166； UniProt 115–280 Author chain E018； PDBConstruct 1–166； UniProt 115–280 Author chain E019； PDBConstruct 1–166； UniProt 115–280 Author chain E020； PDBConstruct 1–166； UniProt 115–280 Author chain E021； PDBConstruct 1–166； UniProt 115–280 Author chain E022； PDBConstruct 1–166； UniProt 115–280 Author chain E023； PDBConstruct 1–166； UniProt 115–280 Author chain F000； PDBConstruct 1–166； UniProt 115–280 Author chain F001； PDBConstruct 1–166； UniProt 115–280 Author chain F002； PDBConstruct 1–166； UniProt 115–280 Author chain F003； PDBConstruct 1–166； UniProt 115–280 Author chain F004； PDBConstruct 1–166； UniProt 115–280 Author chain F005； PDBConstruct 1–166； UniProt 115–280 Author chain F006； PDBConstruct 1–166； UniProt 115–280 Author chain F007； PDBConstruct 1–166； UniProt 115–280 Author chain F008； PDBConstruct 1–166； UniProt 115–280 Author chain F009； PDBConstruct 1–166； UniProt 115–280 Author chain F010； PDBConstruct 1–166； UniProt 115–280 Author chain F011； PDBConstruct 1–166； UniProt 115–280 Author chain F012； PDBConstruct 1–166； UniProt 115–280 Author chain F013； PDBConstruct 1–166； UniProt 115–280 Author chain F014； PDBConstruct 1–166； UniProt 115–280 Author chain F015； PDBConstruct 1–166； UniProt 115–280 Author chain F016； PDBConstruct 1–166； UniProt 115–280 Author chain F017； PDBConstruct 1–166； UniProt 115–280 Author chain F018； PDBConstruct 1–166； UniProt 115–280 Author chain F019； PDBConstruct 1–166； UniProt 115–280 Author chain F020； PDBConstruct 1–166； UniProt 115–280 Author chain F021； PDBConstruct 1–166； UniProt 115–280 Author chain F022； PDBConstruct 1–166； UniProt 115–280 Author chain F023； PDBConstruct 1–166； UniProt 115–280

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9dog
Deposition date deposition_date2024-09-19
Structure title titleOctahedral small virus-like particles of dengue virus type 2 (octahedral reconstruction)
Keywords keywordsdengue virus type 2, virus, flavivirus, virus-like particle, prM-E protein, fusion protein, cryoEM, VIRUS LIKE PARTICLE; VIRUS LIKE PARTICLE
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9dog__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9dog__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9dog__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)136.20 Å
Total Rg136.20 Å
Atom count0
Residues0
Excluded volume6466400 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9dog__assembly_1__model_1 144-meric （144） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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7. Citations (1)