9imu

The complex of rice immune receptor RGA5-HMA8 with rice blast effector protein AVR-PikD

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Disease resistance protein RGA5

Oryza sativa

UniProt F7J0N2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 AVR-Pik protein × 1 (C4B8B8) water × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RGA5R_ORYSJ
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–75; UniProt 996–1070

AVR-Pik protein

Pyricularia oryzae

UniProt C4B8B8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 Disease resistance protein RGA5 × 1 (F7J0N2) water × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name C4B8B8_PYROR
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C; PDBConstruct 1–81; UniProt 33–113

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9imu
Deposition date deposition_date2024-07-04
Last revision last_revision2025-07-09
Structure title titleThe complex of rice immune receptor RGA5-HMA8 with rice blast effector protein AVR-PikD
Keywords keywordsNLR receptor, HMA domain, Non-MAX effector, Rice, Resistance, PLANT PROTEIN; PLANT PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9imu__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9imu__assembly_1__model_1 | I(q)

10-2 10-1 105 106 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9imu__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)16.39 Å
Rg (electron density)15.17 Å
Total Rg16.28 Å
Atom count1222
Residues156
Excluded volume21929 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9imu__assembly_1__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)