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9q9l

HSV-1 prefusion glycoprotein B

Method: ELECTRON MICROSCOPY D_max: 159.4 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

P(r) distribution for 9q9l

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1. Structure Basics

entry_id	9q9l
deposition_date	2025-02-26
title	HSV-1 prefusion glycoprotein B
keywords	Glycoprotein B, viral membrane fusion protein, Herpes simplex virus 1, HSV-1, VIRAL PROTEIN; VIRAL PROTEIN
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	43.69 Å
rg_electron	43.62 Å
i0	835437000.00
molecular_weight	234670.0 kDa
excluded_volume	292150 Å³
envelope_volume	434970 Å³
shell_volume	82042 Å³
envelope_diameter	170.5 Å
shell_rg	49.68 Å
envelope_rg	43.39 Å
shape_rg	43.61 Å
total_rg	43.94 Å
total_atoms	32571
n_residues	2079
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	159.4 Å
rg_real	43.59 Å
rg_real_error	1.59 Å
i0_real	8.3540e+08
i0_real_error	1.6260e+07
rg_reciprocal	43.69 Å
i0_reciprocal	835500000.0000
total_estimate	0.6107
solution_quality	REASONABLE a REASONABLE solution
n_peaks	2
r_peak_primary	53.1 Å
skewness	0.344
kurtosis	0.058
angular_range	— – 0.1800 Å⁻¹
current_alpha	0.0000
highest_alpha	111600000.0000
n_real_points	37
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.630; Stabil: 1.000; Sysdev: 0.032; Positv: 1.000; Valcen: 1.000; Smooth: 0.948

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4. Crystallography & Experiment

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5. Entities & Polymer Info (1)

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6. Citations (1)

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7. Files & Curves (10)