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9qeh

;Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin ;

Method: ELECTRON MICROSCOPY Dmax: 220.2 Å Quality: GOOD

SAXS Profile

SAXS profile for 9qeh

P(r) Distribution

P(r) distribution for 9qeh
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1. Structure Basics

entry_id9qeh
deposition_date2025-03-10
title;Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin ;
keywordsRIBOSOME; RIBOSOME
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier66.47 Å
rg_electron66.94 Å
i050593800000.00
molecular_weight1218000.0 kDa
excluded_volume1235300 ų
envelope_volume2024100 ų
shell_volume230590 ų
envelope_diameter222.1 Å
shell_rg79.71 Å
envelope_rg66.72 Å
shape_rg67.03 Å
total_rg66.88 Å
total_atoms81610
n_residues5783
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax220.2 Å
rg_real66.04 Å
rg_real_error1.47 Å
i0_real5.0590e+10
i0_real_error9.5240e+08
rg_reciprocal66.82 Å
i0_reciprocal50660000000.0000
total_estimate0.8600
solution_quality GOOD a GOOD solution
n_peaks1
r_peak_primary82.6 Å
skewness0.210
kurtosis-0.377
angular_range— – 0.1200 Å−1
current_alpha0.0001
highest_alpha7822000000.0000
n_real_points25
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.808; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.947; Smooth: 0.804
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4. Crystallography & Experiment

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5. Entities & Polymer Info (36)

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6. Citations (1)

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7. Files & Curves (10)