9qof
E.coli seryl-tRNA synthetase (Arm deletion mutant) bound to sulphamoyl seryl-adenylate analogue
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9qof |
| deposition_date | 2025-03-26 |
| last_revision | 2025-05-14 |
| title | E.coli seryl-tRNA synthetase (Arm deletion mutant) bound to sulphamoyl seryl-adenylate analogue |
| keywords | aminoacyl-tRNA synthetase, ATP binding, TRANSLATION; TRANSLATION |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 28.01 Å |
| rg_electron | 27.04 Å |
| i0 | 117835000.00 |
| molecular_weight | 82857.0 kDa |
| excluded_volume | 102520 ų |
| envelope_volume | 124960 ų |
| shell_volume | 37609 ų |
| envelope_diameter | 94.2 Å |
| shell_rg | 35.37 Å |
| envelope_rg | 27.55 Å |
| shape_rg | 27.05 Å |
| total_rg | 27.80 Å |
| total_atoms | 11388 |
| n_residues | 727 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 89.0 Å |
| rg_real | 27.93 Å |
| rg_real_error | 0.52 Å |
| i0_real | 1.1780e+08 |
| i0_real_error | 1.6780e+06 |
| rg_reciprocal | 27.96 Å |
| i0_reciprocal | 117800000.0000 |
| total_estimate | 0.8952 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 32.8 Å |
| skewness | 0.314 |
| kurtosis | -0.301 |
| angular_range | — – 0.2850 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 27630000.0000 |
| n_real_points | 58 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.893; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.955 |