← Back to search
9qq0

KRAS-G12D(1-169) - GDP IN covalent COMPLEX WITH compound (3R,4R)-3

Method: X-RAY DIFFRACTION Dmax: 48.6 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9qq0

P(r) Distribution

P(r) distribution for 9qq0

1. Structure Basics

entry_id9qq0
deposition_date2025-03-31
titleKRAS-G12D(1-169) - GDP IN covalent COMPLEX WITH compound (3R,4R)-3
keywordsK-RAS G12D, GTPASE, GDP BOUND, SWITCH 2 POCKET, COVALENT BINDING, SIGNALING PROTEIN, SMALL G- PROTEIN, HYDROLASE; HYDROLASE
methodX-RAY DIFFRACTION

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier16.06
rg_electron14.98
i013921400.00
molecular_weight18513.0 kDa
excluded_volume17745 ų
envelope_volume26872 ų
shell_volume14860 ų
envelope_diameter49.7
shell_rg21.21
envelope_rg15.25
shape_rg14.94
total_rg15.84
total_atoms1398
n_residues165
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax48.6
rg_real15.92
rg_real_error0.20
i0_real1.3920e+07
i0_real_error1.4890e+05
rg_reciprocal15.93
i0_reciprocal13920000.0000
total_estimate0.9030
solution_quality EXCELLENT a EXCELLENT solution
n_peaks2
r_peak_primary20.9
skewness0.051
kurtosis-0.520
angular_range— – 0.4950 −1
current_alpha0.0000
highest_alpha2667000.0000
n_real_points80
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.922; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.983; Smooth: 0.985

4. Crystallography & Experiment

5. Entities & Polymer Info (6)

6. Citations (1)

7. Files & Curves (10)