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9qq1

KRAS-G12D(1-169) - GDP IN covalent COMPLEX with compound (3S,4R)-8

Method: X-RAY DIFFRACTION Dmax: 48.3 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9qq1

P(r) Distribution

P(r) distribution for 9qq1

1. Structure Basics

entry_id9qq1
deposition_date2025-03-31
titleKRAS-G12D(1-169) - GDP IN covalent COMPLEX with compound (3S,4R)-8
keywordsK-RAS G12D, GTPASE, GDP BOUND, SWITCH 2 POCKET, COVALENT BINDING, SIGNALING PROTEIN, SMALL G- PROTEIN, HYDROLASE; HYDROLASE
methodX-RAY DIFFRACTION

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier16.03
rg_electron14.97
i013724500.00
molecular_weight18412.0 kDa
excluded_volume17656 ų
envelope_volume26689 ų
shell_volume14790 ų
envelope_diameter47.4
shell_rg21.21
envelope_rg15.22
shape_rg14.95
total_rg15.81
total_atoms1393
n_residues166
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax48.3
rg_real15.89
rg_real_error0.18
i0_real1.3720e+07
i0_real_error1.2750e+05
rg_reciprocal15.90
i0_reciprocal13720000.0000
total_estimate0.9048
solution_quality EXCELLENT a EXCELLENT solution
n_peaks2
r_peak_primary20.8
skewness0.041
kurtosis-0.526
angular_range— – 0.4950 −1
current_alpha0.0000
highest_alpha2622000.0000
n_real_points80
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.926; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.982; Smooth: 0.999

4. Crystallography & Experiment

5. Entities & Polymer Info (5)

6. Citations (1)

7. Files & Curves (10)