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9qt5

Structure of the 50S ribosomal subunit from the antibiotic-producing bacterium Streptomyces fradiae

Method: ELECTRON MICROSCOPY Dmax: 224.6 Å Quality: GOOD

SAXS Profile

SAXS profile for 9qt5

P(r) Distribution

P(r) distribution for 9qt5

1. Structure Basics

entry_id9qt5
deposition_date2025-04-07
titleStructure of the 50S ribosomal subunit from the antibiotic-producing bacterium Streptomyces fradiae
keywordsStreptomyces, ribosome, 50S, ribosome-targeting antibiotics; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier67.01
rg_electron68.18
i049614000000.00
molecular_weight1218200.0 kDa
excluded_volume1244700 ų
envelope_volume2056400 ų
shell_volume231450 ų
envelope_diameter224.6
shell_rg80.03
envelope_rg67.85
shape_rg68.24
total_rg68.16
total_atoms81897
n_residues5829
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax224.6
rg_real66.83
rg_real_error1.96
i0_real4.9610e+10
i0_real_error1.0460e+09
rg_reciprocal67.57
i0_reciprocal49680000000.0000
total_estimate0.8579
solution_quality GOOD a GOOD solution
n_peaks1
r_peak_primary87.9
skewness0.226
kurtosis-0.369
angular_range— – 0.1150 −1
current_alpha0.0000
highest_alpha6269000000.0000
n_real_points24
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.804; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.965; Smooth: 0.771

4. Crystallography & Experiment

5. Entities & Polymer Info (30)

6. Citations (1)

7. Files & Curves (10)