9qvf
Turnip Crinkle Virus: virus-like particles (TCV-P38+1)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9qvf |
| deposition_date | 2025-04-11 |
| title | Turnip Crinkle Virus: virus-like particles (TCV-P38+1) |
| keywords | ssRNA plant virus, icosahedral, RNA packaging, VIRUS LIKE PARTICLE; VIRUS LIKE PARTICLE |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 31.45 Å |
| rg_electron | 30.51 Å |
| i0 | 132770000.00 |
| molecular_weight | 90337.0 kDa |
| excluded_volume | 112770 ų |
| envelope_volume | 150170 ų |
| shell_volume | 40552 ų |
| envelope_diameter | 111.7 Å |
| shell_rg | 38.05 Å |
| envelope_rg | 30.04 Å |
| shape_rg | 30.49 Å |
| total_rg | 31.27 Å |
| total_atoms | 12627 |
| n_residues | 838 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 105.4 Å |
| rg_real | 31.24 Å |
| rg_real_error | 0.82 Å |
| i0_real | 1.3280e+08 |
| i0_real_error | 2.1750e+06 |
| rg_reciprocal | 31.33 Å |
| i0_reciprocal | 132800000.0000 |
| total_estimate | 0.6570 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 42.2 Å |
| skewness | 0.098 |
| kurtosis | -0.410 |
| angular_range | — – 0.2500 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 14910000.0000 |
| n_real_points | 51 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.788; Stabil: 1.000; Sysdev: 0.062; Positv: 1.000; Valcen: 0.993; Smooth: 0.995 |