9r7m

HD6 defensin filament with IP6

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Defensin-6

Homo sapiens

UniProt Q01524

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 48 INOSITOL HEXAKISPHOSPHATE × 5 water × 7 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DEF6_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–32; UniProt 69–100 Author chain B; PDBConstruct 1–32; UniProt 69–100 Author chain C; PDBConstruct 1–32; UniProt 69–100 Author chain D; PDBConstruct 1–32; UniProt 69–100 Author chain E; PDBConstruct 1–32; UniProt 69–100 Author chain F; PDBConstruct 1–32; UniProt 69–100 Author chain G; PDBConstruct 1–32; UniProt 69–100 Author chain H; PDBConstruct 1–32; UniProt 69–100 Author chain I; PDBConstruct 1–32; UniProt 69–100 Author chain J; PDBConstruct 1–32; UniProt 69–100 Author chain K; PDBConstruct 1–32; UniProt 69–100 Author chain L; PDBConstruct 1–32; UniProt 69–100 Author chain M; PDBConstruct 1–32; UniProt 69–100 Author chain N; PDBConstruct 1–32; UniProt 69–100 Author chain O; PDBConstruct 1–32; UniProt 69–100 Author chain P; PDBConstruct 1–32; UniProt 69–100 Author chain Q; PDBConstruct 1–32; UniProt 69–100 Author chain R; PDBConstruct 1–32; UniProt 69–100 Author chain S; PDBConstruct 1–32; UniProt 69–100 Author chain T; PDBConstruct 1–32; UniProt 69–100 Author chain U; PDBConstruct 1–32; UniProt 69–100 Author chain V; PDBConstruct 1–32; UniProt 69–100 Author chain W; PDBConstruct 1–32; UniProt 69–100 Author chain X; PDBConstruct 1–32; UniProt 69–100 Author chain Y; PDBConstruct 1–32; UniProt 69–100 Author chain Z; PDBConstruct 1–32; UniProt 69–100 Author chain a; PDBConstruct 1–32; UniProt 69–100 Author chain b; PDBConstruct 1–32; UniProt 69–100 Author chain c; PDBConstruct 1–32; UniProt 69–100 Author chain d; PDBConstruct 1–32; UniProt 69–100 Author chain e; PDBConstruct 1–32; UniProt 69–100 Author chain f; PDBConstruct 1–32; UniProt 69–100 Author chain g; PDBConstruct 1–32; UniProt 69–100 Author chain h; PDBConstruct 1–32; UniProt 69–100 Author chain i; PDBConstruct 1–32; UniProt 69–100 Author chain j; PDBConstruct 1–32; UniProt 69–100 Author chain k; PDBConstruct 1–32; UniProt 69–100 Author chain l; PDBConstruct 1–32; UniProt 69–100 Author chain m; PDBConstruct 1–32; UniProt 69–100 Author chain n; PDBConstruct 1–32; UniProt 69–100 Author chain o; PDBConstruct 1–32; UniProt 69–100 Author chain p; PDBConstruct 1–32; UniProt 69–100 Author chain q; PDBConstruct 1–32; UniProt 69–100 Author chain r; PDBConstruct 1–32; UniProt 69–100 Author chain s; PDBConstruct 1–32; UniProt 69–100 Author chain t; PDBConstruct 1–32; UniProt 69–100 Author chain u; PDBConstruct 1–32; UniProt 69–100 Author chain v; PDBConstruct 1–32; UniProt 69–100

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9r7m
Deposition date deposition_date2025-05-14
Structure title titleHD6 defensin filament with IP6
Keywords keywordsfilament, intestinal, IP5, phytic acid, ANTIMICROBIAL PROTEIN; ANTIMICROBIAL PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9r7m__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9r7m__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9r7m__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)39.44 Å
Rg (electron density)39.04 Å
Total Rg39.33 Å
Atom count12400
Residues1536
Excluded volume215910 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9r7m__assembly_1__model_1 48-meric (48) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)