9r7u
RNA-free helical (h8.5) virus-like particle composed of PVA (isolate B11) coat protein
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9r7u |
| deposition_date | 2025-05-15 |
| title | RNA-free helical (h8.5) virus-like particle composed of PVA (isolate B11) coat protein |
| keywords | potato virus A, virus-like particle, potyvirus, coat protein, helical, VIRUS LIKE PARTICLE; VIRUS LIKE PARTICLE |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 58.62 Å |
| rg_electron | 57.96 Å |
| i0 | 3685440000.00 |
| molecular_weight | 507850.0 kDa |
| excluded_volume | 634190 ų |
| envelope_volume | 1055200 ų |
| shell_volume | 146370 ų |
| envelope_diameter | 202.5 Å |
| shell_rg | 67.83 Å |
| envelope_rg | 54.74 Å |
| shape_rg | 57.93 Å |
| total_rg | 58.29 Å |
| total_atoms | 35592 |
| n_residues | 4392 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 181.1 Å |
| rg_real | 58.13 Å |
| rg_real_error | 1.06 Å |
| i0_real | 3.6850e+09 |
| i0_real_error | 7.6460e+07 |
| rg_reciprocal | 59.03 Å |
| i0_reciprocal | 3691000000.0000 |
| total_estimate | 0.8233 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 87.2 Å |
| skewness | -0.072 |
| kurtosis | -0.322 |
| angular_range | — – 0.1350 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 994100000.0000 |
| n_real_points | 28 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.658; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.949; Smooth: 0.776 |