9rbw
Cryo-EM structure of ANP amyloids from left atrial appendage of atrial fibrillation patient - polymorph B
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9rbw |
| deposition_date | 2025-05-27 |
| title | Cryo-EM structure of ANP amyloids from left atrial appendage of atrial fibrillation patient - polymorph B |
| keywords | amyloid, cardiac amyloidosis, in vivo, aggregation, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 30.36 Å |
| rg_electron | 30.00 Å |
| i0 | 70299300.00 |
| molecular_weight | 56940.0 kDa |
| excluded_volume | 67647 ų |
| envelope_volume | 90728 ų |
| shell_volume | 27359 ų |
| envelope_diameter | 108.0 Å |
| shell_rg | 34.44 Å |
| envelope_rg | 30.44 Å |
| shape_rg | 29.90 Å |
| total_rg | 30.65 Å |
| total_atoms | 3945 |
| n_residues | 515 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 104.5 Å |
| rg_real | 30.70 Å |
| rg_real_error | 1.10 Å |
| i0_real | 7.0300e+07 |
| i0_real_error | 1.2750e+06 |
| rg_reciprocal | 30.55 Å |
| i0_reciprocal | 70290000.0000 |
| total_estimate | 0.6111 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 24.1 Å |
| skewness | 0.562 |
| kurtosis | -0.283 |
| angular_range | — – 0.2600 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 24360000.0000 |
| n_real_points | 53 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.726; Stabil: 1.000; Sysdev: 0.193; Positv: 1.000; Valcen: 0.576; Smooth: 0.605 |