9rkq
Agrobacterium phage 7-7-1 portal
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9rkq |
| deposition_date | 2025-06-14 |
| title | Agrobacterium phage 7-7-1 portal |
| keywords | Flagella phage, Agrobacterium sp. H13-3, Tail spike, VIRUS; VIRUS |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 53.35 Å |
| rg_electron | 52.54 Å |
| i0 | 3689260000.00 |
| molecular_weight | 512850.0 kDa |
| excluded_volume | 642450 ų |
| envelope_volume | 918820 ų |
| shell_volume | 136030 ų |
| envelope_diameter | 157.6 Å |
| shell_rg | 63.22 Å |
| envelope_rg | 51.30 Å |
| shape_rg | 52.53 Å |
| total_rg | 52.84 Å |
| total_atoms | 71796 |
| n_residues | 4680 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 146.9 Å |
| rg_real | 53.03 Å |
| rg_real_error | 0.48 Å |
| i0_real | 3.6890e+09 |
| i0_real_error | 5.0970e+07 |
| rg_reciprocal | 53.60 Å |
| i0_reciprocal | 3692000000.0000 |
| total_estimate | 0.8454 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 70.9 Å |
| skewness | 0.032 |
| kurtosis | -0.602 |
| angular_range | — – 0.1450 Å−1 |
| current_alpha | 0.0001 |
| highest_alpha | 449700000.0000 |
| n_real_points | 30 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.996; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.990; Smooth: 0.008 |