9rkt
Agrobacterium phage 7-7-1 collar
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9rkt |
| deposition_date | 2025-06-14 |
| title | Agrobacterium phage 7-7-1 collar |
| keywords | Flagella phage, Agrobacterium sp. H13-3, Collar, VIRUS; VIRUS |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 98.65 Å |
| rg_electron | 97.56 Å |
| i0 | 24387100000.00 |
| molecular_weight | 1349300.0 kDa |
| excluded_volume | 1690500 ų |
| envelope_volume | 3963100 ų |
| shell_volume | 330010 ų |
| envelope_diameter | 267.0 Å |
| shell_rg | 112.20 Å |
| envelope_rg | 87.01 Å |
| shape_rg | 97.63 Å |
| total_rg | 97.41 Å |
| total_atoms | 187260 |
| n_residues | 12480 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 246.6 Å |
| rg_real | 97.26 Å |
| rg_real_error | 0.46 Å |
| i0_real | 2.4250e+10 |
| i0_real_error | 3.9110e+08 |
| rg_reciprocal | 102.70 Å |
| i0_reciprocal | 24730000000.0000 |
| total_estimate | 0.8169 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 154.1 Å |
| skewness | -0.331 |
| kurtosis | -0.791 |
| angular_range | — – 0.0800 Å−1 |
| current_alpha | 0.2208 |
| highest_alpha | 3955000000.0000 |
| n_real_points | 17 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.893; Stabil: 0.997; Sysdev: 1.000; Positv: 1.000; Valcen: 0.928; Smooth: 0.000 |