;Protein 2A from Theiler's murine encephalomyelitis virus (TMEV) bound to RNA pseudoknot ;

entry_id	9rvp
deposition_date	2025-07-08
last_revision	2025-07-30
title	;Protein 2A from Theiler's murine encephalomyelitis virus (TMEV) bound to RNA pseudoknot ;
keywords	pseudoknot, RNA-protein complex, frameshifting, cardiovirus, RNA; RNA
method	X-RAY DIFFRACTION

rg_guinier	20.73 Å
rg_electron	19.75 Å
i0	16251300.00
molecular_weight	24162.0 kDa
excluded_volume	27464 ų
envelope_volume	36967 ų
shell_volume	16658 ų
envelope_diameter	64.4 Å
shell_rg	24.61 Å
envelope_rg	19.72 Å
shape_rg	19.65 Å
total_rg	20.58 Å
total_atoms	3005
n_residues	153
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	63.7 Å
rg_real	20.70 Å
rg_real_error	0.37 Å
i0_real	1.6250e+07
i0_real_error	2.1230e+05
rg_reciprocal	20.71 Å
i0_reciprocal	16250000.0000
total_estimate	0.9154
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	24.0 Å
skewness	0.223
kurtosis	-0.603
angular_range	— – 0.3850 Å−1
current_alpha	0.0000
highest_alpha	1031000.0000
n_real_points	70
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.970; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.993; Smooth: 0.994

Unit Cell

length_a	104.191 Å
length_b	45.931 Å
length_c	65.720 Å
angle_alpha	90.00 °
angle_beta	127.34 °
angle_gamma	90.00 °
z_pdb	4

Symmetry

space_group	C 1 2 1
int_tables_number	5
crystal_system	monoclinic

Refinement

resolution	1.900 Å
resolution_low	52.250 Å
r_factor	0.1948
r_work	0.1931
r_free	0.2295

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/rv/9rvp/pr_distribution.json
• pr_output /app/data/pr_computation/rv/9rvp/9rvp.pr.out
• pr_plot /app/data/visualization/pr_computation/rv/9rvp/9rvp_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/rv/9rvp/9rvp.dat
• saxs_fit /app/data/saxs_computation/rv/9rvp/9rvp.fit
• saxs_log /app/data/saxs_computation/rv/9rvp/9rvp.log
• saxs_plot /app/data/visualization/saxs_computation/rv/9rvp/9rvp_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/rv/9rvp/9rvp.fit
pddf	/app/data/pr_computation/rv/9rvp/9rvp.pr.out
profile	/app/data/saxs_computation/rv/9rvp/9rvp.dat