9s2d
KHNYN exPIN nuclease
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9s2d |
| deposition_date | 2025-07-21 |
| last_revision | 2025-12-31 |
| title | KHNYN exPIN nuclease |
| keywords | KHNYN, nuclease, antiviral, RNA BINDING PROTEIN; RNA BINDING PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 25.72 Å |
| rg_electron | 24.89 Å |
| i0 | 24425200.00 |
| molecular_weight | 38753.0 kDa |
| excluded_volume | 48878 ų |
| envelope_volume | 61408 ų |
| shell_volume | 21491 ų |
| envelope_diameter | 89.3 Å |
| shell_rg | 30.85 Å |
| envelope_rg | 24.87 Å |
| shape_rg | 24.89 Å |
| total_rg | 25.67 Å |
| total_atoms | 2741 |
| n_residues | 345 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 86.2 Å |
| rg_real | 25.83 Å |
| rg_real_error | 0.70 Å |
| i0_real | 2.4430e+07 |
| i0_real_error | 3.4620e+05 |
| rg_reciprocal | 25.80 Å |
| i0_reciprocal | 24420000.0000 |
| total_estimate | 0.8786 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 25.0 Å |
| skewness | 0.418 |
| kurtosis | -0.469 |
| angular_range | — – 0.3100 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 4413000.0000 |
| n_real_points | 63 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.846; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.892; Smooth: 0.988 |