9s3s
Capsid structure of Chaetoceros lorenzianus DNA virus (ClorDNAV), a CRESS-DNA bacilladnavirus
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9s3s |
| deposition_date | 2025-07-25 |
| title | Capsid structure of Chaetoceros lorenzianus DNA virus (ClorDNAV), a CRESS-DNA bacilladnavirus |
| keywords | ;CRESS-DNA virus; Cressdnaviricota; Bacilladnaviridae; ClorDNAV; capsid structure; single-stranded DNA virus; jelly-roll; structural virology; virus evolution, VIRUS ;; VIRUS |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 30.69 Å |
| rg_electron | 29.74 Å |
| i0 | 204456000.00 |
| molecular_weight | 111750.0 kDa |
| excluded_volume | 138700 ų |
| envelope_volume | 160710 ų |
| shell_volume | 44319 ų |
| envelope_diameter | 101.7 Å |
| shell_rg | 37.35 Å |
| envelope_rg | 29.82 Å |
| shape_rg | 29.72 Å |
| total_rg | 30.37 Å |
| total_atoms | 15534 |
| n_residues | 1027 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 95.2 Å |
| rg_real | 30.59 Å |
| rg_real_error | 0.61 Å |
| i0_real | 2.0450e+08 |
| i0_real_error | 3.0460e+06 |
| rg_reciprocal | 30.63 Å |
| i0_reciprocal | 204500000.0000 |
| total_estimate | 0.8981 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 36.6 Å |
| skewness | 0.261 |
| kurtosis | -0.406 |
| angular_range | — – 0.2600 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 33600000.0000 |
| n_real_points | 53 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.934; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.871 |