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9scu

Cryo-EM structure of the Arabidopsis thaliana 60S ribosomal subunit

Method: ELECTRON MICROSCOPY Dmax: 280.5 Å Quality: GOOD

SAXS Profile

SAXS profile for 9scu

P(r) Distribution

P(r) distribution for 9scu

1. Structure Basics

entry_id9scu
deposition_date2025-08-12
titleCryo-EM structure of the Arabidopsis thaliana 60S ribosomal subunit
keywordsArabidopsis, Ribosome, CryoEM; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier75.34
rg_electron76.93
i088296600000.00
molecular_weight1745200.0 kDa
excluded_volume1859000 ų
envelope_volume3046900 ų
shell_volume300330 ų
envelope_diameter270.2
shell_rg90.69
envelope_rg76.85
shape_rg77.00
total_rg76.86
total_atoms118119
n_residues9280
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax280.5
rg_real78.49
rg_real_error1.35
i0_real8.8300e+10
i0_real_error1.8390e+09
rg_reciprocal76.14
i0_reciprocal88480000000.0000
total_estimate0.8819
solution_quality GOOD a GOOD solution
n_peaks2
r_peak_primary93.5
skewness0.539
kurtosis0.371
angular_range— – 0.1050 −1
current_alpha0.9682
highest_alpha13710000000.0000
n_real_points22
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.653; Stabil: 0.894; Sysdev: 1.000; Positv: 1.000; Valcen: 0.948; Smooth: 0.898

4. Crystallography & Experiment

5. Entities & Polymer Info (46)

6. Citations (1)

7. Files & Curves (10)