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9sy5

Engineering the ADDomer Nanoparticle Vaccine Scaffold for Improved Assembly and Enhanced Stability.

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Penton protein

Chimpanzee adenovirus Y25

UniProt G9G849

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 10 No other associated polymer Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers
9swa 9sy5

2 assemblies

Heteromeric or nucleic-acid complex
7rd1 7rd1 7rd1 7rd1 7rd1

5 assemblies

View Construct and Data Evidence
UniProt name G9G849_9ADEN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 8； PDBConstruct 1–543； UniProt 1–532 Author chain K； PDBConstruct 1–543； UniProt 1–532 Author chain R； PDBConstruct 1–543； UniProt 1–532 Author chain T； PDBConstruct 1–543； UniProt 1–532 Author chain X； PDBConstruct 1–543； UniProt 1–532 Author chain i； PDBConstruct 1–543； UniProt 1–532 Author chain j； PDBConstruct 1–543； UniProt 1–532 Author chain k； PDBConstruct 1–543； UniProt 1–532 Author chain v； PDBConstruct 1–543； UniProt 1–532 Author chain w； PDBConstruct 1–543； UniProt 1–532

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9sy5
Deposition date deposition_date2025-10-10
Structure title titleEngineering the ADDomer Nanoparticle Vaccine Scaffold for Improved Assembly and Enhanced Stability.
Keywords keywordsAdenovirus, Nanoparticle, Disulphide bond, Thermostable., VIRUS LIKE PARTICLE; VIRUS LIKE PARTICLE
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9sy5__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9sy5__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9sy5__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）59.95 Å
Rg (electron density)60.26 Å
Total Rg60.32 Å
Atom count34047
Residues4256
Excluded volume603170 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9sy5__assembly_1__model_1 decameric （10） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (1)

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7. Citations (1)