9u8k
Structure of ASC-PYD filament from condensates
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9u8k |
| deposition_date | 2025-03-26 |
| title | Structure of ASC-PYD filament from condensates |
| keywords | ASC-PYD, filament, condensates, IMMUNE SYSTEM; IMMUNE SYSTEM |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 57.38 Å |
| rg_electron | 57.73 Å |
| i0 | 2145780000.00 |
| molecular_weight | 394230.0 kDa |
| excluded_volume | 497780 ų |
| envelope_volume | 703720 ų |
| shell_volume | 106140 ų |
| envelope_diameter | 202.3 Å |
| shell_rg | 54.95 Å |
| envelope_rg | 57.22 Å |
| shape_rg | 57.74 Å |
| total_rg | 57.61 Å |
| total_atoms | 27577 |
| n_residues | 3477 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 186.4 Å |
| rg_real | 57.86 Å |
| rg_real_error | 1.44 Å |
| i0_real | 2.1460e+09 |
| i0_real_error | 4.0460e+07 |
| rg_reciprocal | 56.95 Å |
| i0_reciprocal | 2143000000.0000 |
| total_estimate | 0.7850 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 55.2 Å |
| skewness | 0.613 |
| kurtosis | -0.206 |
| angular_range | — – 0.1350 Å−1 |
| current_alpha | 0.0001 |
| highest_alpha | 1194000000.0000 |
| n_real_points | 28 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.696; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.989; Smooth: 0.124 |