;Sub-particle structure of the iterative acetyltransferase from Actinomycetes in complex with AcCoA and monoacetylated lasso peptides ;

entry_id	9ubc
deposition_date	2025-04-02
title	;Sub-particle structure of the iterative acetyltransferase from Actinomycetes in complex with AcCoA and monoacetylated lasso peptides ;
keywords	GCN5-related N-acetyltransferases, Actinomycetes, AcCoA, Lasso peptides, TRANSFERASE; TRANSFERASE
method	ELECTRON MICROSCOPY

rg_guinier	17.86 Å
rg_electron	16.59 Å
i0	11232800.00
molecular_weight	23387.0 kDa
excluded_volume	28644 ų
envelope_volume	34068 ų
shell_volume	17038 ų
envelope_diameter	58.1 Å
shell_rg	22.90 Å
envelope_rg	16.87 Å
shape_rg	16.58 Å
total_rg	17.59 Å
total_atoms	1649
n_residues	203
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	58.5 Å
rg_real	17.70 Å
rg_real_error	0.30 Å
i0_real	1.1230e+07
i0_real_error	1.2300e+05
rg_reciprocal	17.72 Å
i0_reciprocal	11230000.0000
total_estimate	0.7977
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	23.7 Å
skewness	0.080
kurtosis	-0.388
angular_range	— – 0.4450 Å−1
current_alpha	0.0000
highest_alpha	2558000.0000
n_real_points	75
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.793; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.989; Smooth: 0.000

Unit Cell

length_a	1.000 Å
length_b	1.000 Å
length_c	1.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	—

Symmetry

space_group	P 1
int_tables_number	1
crystal_system	—

Refinement

resolution	3.430 Å
resolution_low	— Å
r_factor	—
r_work	—
r_free	—

EM 3D

resolution	3.43 Å
resolution_method	—
num_particles	78368

Files (7)

• pr_distribution /app/data/pr_computation/ub/9ubc/pr_distribution.json
• pr_output /app/data/pr_computation/ub/9ubc/9ubc.pr.out
• pr_plot /app/data/visualization/pr_computation/ub/9ubc/9ubc_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/ub/9ubc/9ubc.dat
• saxs_fit /app/data/saxs_computation/ub/9ubc/9ubc.fit
• saxs_log /app/data/saxs_computation/ub/9ubc/9ubc.log
• saxs_plot /app/data/visualization/saxs_computation/ub/9ubc/9ubc_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/ub/9ubc/9ubc.fit
pddf	/app/data/pr_computation/ub/9ubc/9ubc.pr.out
profile	/app/data/saxs_computation/ub/9ubc/9ubc.dat