beta-glucosidase GH1-family

Method: X-RAY DIFFRACTION D_max: 101.8 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	9uct
deposition_date	2025-04-05
last_revision	2026-04-08
title	beta-glucosidase GH1-family
keywords	beta-glucosidase, HYDROLASE; HYDROLASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	31.55 Å
rg_electron	30.86 Å
i0	161994000.00
molecular_weight	106270.0 kDa
excluded_volume	134580 Å³
envelope_volume	157640 Å³
shell_volume	42168 Å³
envelope_diameter	107.0 Å
shell_rg	38.47 Å
envelope_rg	30.53 Å
shape_rg	30.82 Å
total_rg	31.63 Å
total_atoms	7540
n_residues	904
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	101.8 Å
rg_real	31.54 Å
rg_real_error	0.65 Å
i0_real	1.6200e+08
i0_real_error	2.8700e+06
rg_reciprocal	31.55 Å
i0_reciprocal	162000000.0000
total_estimate	0.8906
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	34.6 Å
skewness	0.336
kurtosis	-0.463
angular_range	— – 0.2500 Å⁻¹
current_alpha	0.0000
highest_alpha	43180000.0000
n_real_points	51
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.891; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.900

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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length_a	74.603 Å
length_b	96.871 Å
length_c	143.005 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 21 21 21
int_tables_number	19
crystal_system	orthorhombic

resolution	1.900 Å
resolution_low	37.110 Å
r_factor	0.1556
r_work	0.1550
r_free	0.1803

description	beta-glucosidase
formula_weight	53227.3 kDa
ec_number	3.2.1.21
src_method	man
entity_count	2

type	polypeptide(L)
strand_id	A,B
atom_count	8500

beta-glucosidase GH1-family

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Caldicellulosiruptor bescii DSM 6725
ncbi_taxonomy_id	521460
host_organism	Escherichia coli

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	960

fit	/app/data/saxs_computation/uc/9uct/9uct.fit
pddf	/app/data/pr_computation/uc/9uct/9uct.pr.out
profile	/app/data/saxs_computation/uc/9uct/9uct.dat