SAXSdb — 9uer

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1. Structure Basics

entry_id	9uer
deposition_date	2025-04-09
title	AcrIE10-Cas7-IR complex
keywords	Anti-CRISPR, Transcription inhibitor, TRANSCRIPTION; TRANSCRIPTION
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	36.22 Å
rg_electron	36.34 Å
i0	230864000.00
molecular_weight	112600.0 kDa
excluded_volume	136820 Å³
envelope_volume	190880 Å³
shell_volume	45573 Å³
envelope_diameter	129.1 Å
shell_rg	40.60 Å
envelope_rg	35.85 Å
shape_rg	36.33 Å
total_rg	36.64 Å
total_atoms	7873
n_residues	938
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	124.2 Å
rg_real	36.41 Å
rg_real_error	1.03 Å
i0_real	2.3090e+08
i0_real_error	3.5890e+06
rg_reciprocal	36.30 Å
i0_reciprocal	230800000.0000
total_estimate	0.8506
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	39.5 Å
skewness	0.503
kurtosis	-0.246
angular_range	— – 0.2200 Å⁻¹
current_alpha	0.0000
highest_alpha	32310000.0000
n_real_points	45
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.773; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.931; Smooth: 0.805

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4. Crystallography & Experiment

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5. Entities & Polymer Info (4)

Entity 1 polymer

description	;DNA (5'-D(PTPGPTPAPTPGPAPCPAPTPCPTPGPTPCPAPTPAP*C)-3') ;
formula_weight	5794.8 kDa
src_method	syn
entity_count	1

Polymer

type	polydeoxyribonucleotide
strand_id	G
atom_count	7873

TGTATGACATCTGTCATAC

Entity 2 polymer

description	;DNA (5'-D(PGPTPAPTPGPAPCPAPGPAPTPGPTPCPAPTPAPCPAPA)-3') ;
formula_weight	6166.0 kDa
src_method	syn
entity_count	1

Polymer

type	polydeoxyribonucleotide
strand_id	H

GTATGACAGATGTCATACAA

Entity 3 polymer

description	AcrIE10
formula_weight	13185.8 kDa
src_method	man
entity_count	4

Polymer

type	polypeptide(L)
strand_id	A,B,C,D

VKKEISRNPSFTPSPKLRAHLNSHREGVTERLNNIFDRYAHLVRACALPLDDDETQVLLNVLNGSVVEPAFIEYLAQEIRDSDDYLEGIPAAKSLYEKCQSATYPQLLATVERLDR

Source

organism	Klebsiella pneumoniae
ncbi_taxonomy_id	573
host_organism	Escherichia coli

Entity 4 polymer

description	CRISPR-associated protein Cse4
formula_weight	38323.2 kDa
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	E,F

MTTFIQLHLLTAYPAANLNRDDTGAPKTVMLGGATRLRISSQSLKRAWRTSELFEHALAGHIGIRSGRIAREAAEILVKSGIEPRKAVDYVKAIGECFGKVKTKADQNDPLKCSETEQLAHISPAEFDAVKALAHRLAEEKRAATKEEAALLRHDRMAVDIAMFGRMLADQPTYNVEAACQVAHAFGVSETIVEDDFFTAVDDLRAASEDAGAGHLGETGFGSALFYTYICIDKDLLVNNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYQPINGGDQLDVAVQRITALRENMNTVYGQQTAFQHFDVMNKQGSMNDVLDFICA

Source

organism	Klebsiella pneumoniae
ncbi_taxonomy_id	573
host_organism	Escherichia coli

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6. Citations (1)

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length_a	1.000 Å
length_b	1.000 Å
length_c	1.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	—

space_group	P 1
int_tables_number	1
crystal_system	—

resolution	3.64 Å
resolution_method	—
num_particles	108754

fit	/app/data/saxs_computation/ue/9uer/9uer.fit
pddf	/app/data/pr_computation/ue/9uer/9uer.pr.out
profile	/app/data/saxs_computation/ue/9uer/9uer.dat

AcrIE10-Cas7-IR complex

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

EM 3D

5. Entities & Polymer Info (4)

Entity 1 polymer

Polymer

Entity 2 polymer

Polymer

Entity 3 polymer

Polymer

Source

Entity 4 polymer

Polymer

Source

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)