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9up3

Crystal structure of Ebola virus VP30 and its peptide NPL3

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Transcriptional activator VP30

Ebola virus

UniProt A0A0E3KX28

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 Peptide NPL3 × 1 water × 2 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 2 Peptide NPL3 × 1 water × 2 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 2 Peptide NPL3 × 1 water × 1 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 2 Peptide NPL3 × 1 water × 1 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 4 Peptide NPL3 × 2 water × 4 Consistent with protein count
6 Protein heterocomplex Heteromer Protein 4 Peptide NPL3 × 2 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
9up3 9up3 9up3 9up3 9up3 9up3 9up4

7 assemblies

View Construct and Data Evidence
UniProt name A0A0E3KX28_9MONO
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–128； UniProt 139–266 Author chain B； PDBConstruct 1–128； UniProt 139–266 Author chain D； PDBConstruct 1–128； UniProt 139–266 Author chain G； PDBConstruct 1–128； UniProt 139–266

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9up3
Deposition date deposition_date2025-04-27
Last revision last_revision2026-04-29
Structure title titleCrystal structure of Ebola virus VP30 and its peptide NPL3
Keywords keywordsEbola virus, VP30, VIRAL PROTEIN; VIRAL PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9up3__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9up3__assembly_1__model_1 | I(q)

10-2 10-1 105 106 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9up3__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）16.18 Å
Rg (electron density)15.00 Å
Total Rg16.22 Å
Atom count1048
Residues132
Excluded volume18851 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9up3__assembly_1__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 9up3__assembly_2__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
3 1 9up3__assembly_3__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
4 1 9up3__assembly_4__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
5 1 9up3__assembly_5__model_1 tetrameric （4） Success 4.1.3-1-20251215 (887e7ef) View Download
6 1 9up3__assembly_6__model_1 tetrameric （4） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)