9up5
Crystal structure of LapB from Klebsiella pneumoniae
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9up5 |
| deposition_date | 2025-04-27 |
| last_revision | 2026-03-04 |
| title | Crystal structure of LapB from Klebsiella pneumoniae |
| keywords | Lipopolysaccharide assembly, Protein-protein interaction, Inner membrane protein, Envelope biogenesis, CHAPERONE; CHAPERONE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 32.73 Å |
| rg_electron | 32.22 Å |
| i0 | 102326000.00 |
| molecular_weight | 77147.0 kDa |
| excluded_volume | 95619 ų |
| envelope_volume | 134100 ų |
| shell_volume | 35721 ų |
| envelope_diameter | 100.8 Å |
| shell_rg | 38.04 Å |
| envelope_rg | 31.42 Å |
| shape_rg | 32.23 Å |
| total_rg | 32.72 Å |
| total_atoms | 5402 |
| n_residues | 673 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 102.3 Å |
| rg_real | 32.60 Å |
| rg_real_error | 0.76 Å |
| i0_real | 1.0230e+08 |
| i0_real_error | 1.7390e+06 |
| rg_reciprocal | 32.66 Å |
| i0_reciprocal | 102300000.0000 |
| total_estimate | 0.9126 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 1 |
| r_peak_primary | 42.6 Å |
| skewness | 0.114 |
| kurtosis | -0.642 |
| angular_range | — – 0.2400 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 5863000.0000 |
| n_real_points | 49 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.964; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.969 |