Crystal Structure of tricyclene synthase

Method: X-RAY DIFFRACTION D_max: 127.1 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	9v41
deposition_date	2025-05-22
last_revision	2026-05-27
title	Crystal Structure of tricyclene synthase
keywords	Tricyclene synthase, Monoterpene Synthase, LYASE; LYASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	37.50 Å
rg_electron	37.16 Å
i0	191427000.00
molecular_weight	114460.0 kDa
excluded_volume	144260 Å³
envelope_volume	197200 Å³
shell_volume	44915 Å³
envelope_diameter	130.5 Å
shell_rg	42.75 Å
envelope_rg	36.38 Å
shape_rg	37.13 Å
total_rg	37.66 Å
total_atoms	8064
n_residues	1001
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	127.1 Å
rg_real	37.64 Å
rg_real_error	1.46 Å
i0_real	1.9140e+08
i0_real_error	3.6440e+06
rg_reciprocal	37.56 Å
i0_reciprocal	191400000.0000
total_estimate	0.8725
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	36.3 Å
skewness	0.379
kurtosis	-0.522
angular_range	— – 0.2100 Å⁻¹
current_alpha	0.0000
highest_alpha	36520000.0000
n_real_points	43
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.839; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.953; Smooth: 0.867

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4. Crystallography & Experiment

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5. Entities & Polymer Info (1)

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6. Citations (1)

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length_a	59.267 Å
length_b	108.860 Å
length_c	188.851 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	3.520 Å
resolution_low	43.310 Å
r_factor	0.2335
r_work	0.2279
r_free	0.2848

description	(-)-camphene/tricyclene synthase, chloroplastic-like
formula_weight	63274.2 kDa
src_method	man
entity_count	2

type	polypeptide(L)
strand_id	A,B
atom_count	8064

Crystal Structure of tricyclene synthase

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (1)

Entity 1 polymer

Polymer

Source

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Nicotiana sylvestris
common_name	wood tobacco
ncbi_taxonomy_id	4096
host_organism	Escherichia coli

fit	/app/data/saxs_computation/v4/9v41/9v41.fit
pddf	/app/data/pr_computation/v4/9v41/9v41.pr.out
profile	/app/data/saxs_computation/v4/9v41/9v41.dat