Structure of FtsZ1 in complex with GMPCPP from Candidatus Odinarchaeota

Method: ELECTRON MICROSCOPY D_max: 181.8 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	9v7v
deposition_date	2025-05-28
title	Structure of FtsZ1 in complex with GMPCPP from Candidatus Odinarchaeota
keywords	Cell division Protein, CELL CYCLE; CELL CYCLE
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	52.13 Å
rg_electron	53.59 Å
i0	235748000.00
molecular_weight	127440.0 kDa
excluded_volume	160590 Å³
envelope_volume	219130 Å³
shell_volume	41758 Å³
envelope_diameter	195.0 Å
shell_rg	42.69 Å
envelope_rg	54.39 Å
shape_rg	53.59 Å
total_rg	53.13 Å
total_atoms	8912
n_residues	1196
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	181.8 Å
rg_real	53.14 Å
rg_real_error	2.88 Å
i0_real	2.3570e+08
i0_real_error	5.1310e+06
rg_reciprocal	51.29 Å
i0_reciprocal	235100000.0000
total_estimate	0.6199
solution_quality	REASONABLE a REASONABLE solution
n_peaks	2
r_peak_primary	30.3 Å
skewness	0.698
kurtosis	-0.337
angular_range	— – 0.1500 Å⁻¹
current_alpha	0.0000
highest_alpha	9389000.0000
n_real_points	31
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.211; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.207; Smooth: 0.217

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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length_a	1.000 Å
length_b	1.000 Å
length_c	1.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	—

space_group	P 1
int_tables_number	1
crystal_system	—

resolution	3.600 Å
resolution_low	— Å
r_factor	—
r_work	—
r_free	—

resolution	3.60 Å
resolution_method	—
num_particles	356932

description	Cell division protein FtsZ
formula_weight	38742.8 kDa
src_method	man
entity_count	4

Structure of FtsZ1 in complex with GMPCPP from Candidatus Odinarchaeota

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

EM 3D

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 non-polymer

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Candidatus Odinarchaeota
ncbi_taxonomy_id	1936271
host_organism	Escherichia coli

description	PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
formula_weight	521.2 kDa
src_method	syn
entity_count	4

fit	/app/data/saxs_computation/v7/9v7v/9v7v.fit
pddf	/app/data/pr_computation/v7/9v7v/9v7v.pr.out
profile	/app/data/saxs_computation/v7/9v7v/9v7v.dat

type	polypeptide(L)
strand_id	A,B,C,D
atom_count	8912