9vlf
;Structural studies on the conformation changes induced by ligand binding in an Adenine phosphoribosyltransferase (FnAPRT) from Fusobacterium nucleatum ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9vlf |
| deposition_date | 2025-06-25 |
| title | ;Structural studies on the conformation changes induced by ligand binding in an Adenine phosphoribosyltransferase (FnAPRT) from Fusobacterium nucleatum ; |
| keywords | Fusobacterium nucleatum, Adenine phosphoribosyltransferase, ligand binding, Transferase; TRANSFERASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 16.97 Å |
| rg_electron | 15.64 Å |
| i0 | 6569640.00 |
| molecular_weight | 19330.0 kDa |
| excluded_volume | 24513 ų |
| envelope_volume | 27546 ų |
| shell_volume | 14803 ų |
| envelope_diameter | 50.7 Å |
| shell_rg | 21.65 Å |
| envelope_rg | 15.91 Å |
| shape_rg | 15.65 Å |
| total_rg | 16.72 Å |
| total_atoms | 1359 |
| n_residues | 170 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 52.1 Å |
| rg_real | 16.86 Å |
| rg_real_error | 0.22 Å |
| i0_real | 6.5700e+06 |
| i0_real_error | 7.2190e+04 |
| rg_reciprocal | 16.87 Å |
| i0_reciprocal | 6570000.0000 |
| total_estimate | 0.8983 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 21.9 Å |
| skewness | 0.131 |
| kurtosis | -0.427 |
| angular_range | — – 0.4700 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1368000.0000 |
| n_real_points | 77 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.908; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.987; Smooth: 0.963 |