Cryo-EM structure of hAQP11 in LMNG

Method: ELECTRON MICROSCOPY D_max: 65.6 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	9vxw
deposition_date	2025-07-20
title	Cryo-EM structure of hAQP11 in LMNG
keywords	MEMBRANE PROTEIN; MEMBRANE PROTEIN
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	19.03 Å
rg_electron	18.30 Å
i0	12271500.00
molecular_weight	28178.0 kDa
excluded_volume	36213 Å³
envelope_volume	41041 Å³
shell_volume	18873 Å³
envelope_diameter	67.3 Å
shell_rg	24.64 Å
envelope_rg	18.62 Å
shape_rg	18.32 Å
total_rg	19.26 Å
total_atoms	1979
n_residues	254
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	65.6 Å
rg_real	18.98 Å
rg_real_error	0.44 Å
i0_real	1.2270e+07
i0_real_error	1.5700e+05
rg_reciprocal	18.98 Å
i0_reciprocal	12270000.0000
total_estimate	0.7822
solution_quality	GOOD a GOOD solution
n_peaks	3
r_peak_primary	24.6 Å
skewness	0.305
kurtosis	-0.097
angular_range	— – 0.4200 Å⁻¹
current_alpha	0.0000
highest_alpha	1753000.0000
n_real_points	73
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.724; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.991; Smooth: 0.000

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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length_a	1.000 Å
length_b	1.000 Å
length_c	1.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	—

space_group	P 1
int_tables_number	1
crystal_system	—

resolution	2.30 Å
resolution_method	—
num_particles	202060

description	Aquaporin-11,sfGFP
formula_weight	60011.0 kDa
src_method	man
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	1979

Cryo-EM structure of hAQP11 in LMNG

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

EM 3D

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 non-polymer

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Aequorea victoria
ncbi_taxonomy_id	6100
host_organism	Homo sapiens

description	DECANE
formula_weight	142.3 kDa
src_method	syn
entity_count	1

fit	/app/data/saxs_computation/vx/9vxw/9vxw.fit
pddf	/app/data/pr_computation/vx/9vxw/9vxw.pr.out
profile	/app/data/saxs_computation/vx/9vxw/9vxw.dat