9vyv
Crystal structure of UPF0235 protein PF1765 from Pyrococcus furiosus at pH 4
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9vyv |
| deposition_date | 2025-07-21 |
| title | Crystal structure of UPF0235 protein PF1765 from Pyrococcus furiosus at pH 4 |
| keywords | PF02594, evolutionary conserved, UNKNOWN FUNCTION; UNKNOWN FUNCTION |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 17.92 Å |
| rg_electron | 17.11 Å |
| i0 | 7393600.00 |
| molecular_weight | 21450.0 kDa |
| excluded_volume | 27700 ų |
| envelope_volume | 31716 ų |
| shell_volume | 15776 ų |
| envelope_diameter | 63.1 Å |
| shell_rg | 22.92 Å |
| envelope_rg | 17.60 Å |
| shape_rg | 17.07 Å |
| total_rg | 18.29 Å |
| total_atoms | 1508 |
| n_residues | 194 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 63.0 Å |
| rg_real | 17.90 Å |
| rg_real_error | 0.51 Å |
| i0_real | 7.3940e+06 |
| i0_real_error | 9.8890e+04 |
| rg_reciprocal | 17.90 Å |
| i0_reciprocal | 7394000.0000 |
| total_estimate | 0.8404 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 22.1 Å |
| skewness | 0.360 |
| kurtosis | -0.185 |
| angular_range | — – 0.4450 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 2538000.0000 |
| n_real_points | 75 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.648; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.984; Smooth: 0.994 |