9wsc
Crystal structure of PcNLP485 effector protein from P.capsici
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9wsc |
| deposition_date | 2025-09-12 |
| last_revision | 2025-10-15 |
| title | Crystal structure of PcNLP485 effector protein from P.capsici |
| keywords | Necrosis and ethylene-inducing peptide 1 like (NLP), TOXIN; TOXIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 17.80 Å |
| rg_electron | 16.68 Å |
| i0 | 10866400.00 |
| molecular_weight | 24937.0 kDa |
| excluded_volume | 31351 ų |
| envelope_volume | 35230 ų |
| shell_volume | 17345 ų |
| envelope_diameter | 60.2 Å |
| shell_rg | 23.15 Å |
| envelope_rg | 17.11 Å |
| shape_rg | 16.65 Å |
| total_rg | 17.84 Å |
| total_atoms | 1765 |
| n_residues | 222 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 63.0 Å |
| rg_real | 17.66 Å |
| rg_real_error | 0.38 Å |
| i0_real | 1.0870e+07 |
| i0_real_error | 1.1790e+05 |
| rg_reciprocal | 17.68 Å |
| i0_reciprocal | 10870000.0000 |
| total_estimate | 0.7675 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 23.0 Å |
| skewness | 0.140 |
| kurtosis | -0.367 |
| angular_range | — – 0.4450 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 3568000.0000 |
| n_real_points | 75 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.658; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.000 |