9wzm
Crystal structure of rice protein disulfide isomerase-like protein OsPDIL2-3 a0 domain
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9wzm |
| deposition_date | 2025-09-29 |
| title | Crystal structure of rice protein disulfide isomerase-like protein OsPDIL2-3 a0 domain |
| keywords | endosperm, PLANT PROTEIN; PLANT PROTEIN |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.49 Å |
| rg_electron | 14.05 Å |
| i0 | 3116130.00 |
| molecular_weight | 12961.0 kDa |
| excluded_volume | 16513 ų |
| envelope_volume | 18486 ų |
| shell_volume | 11508 ų |
| envelope_diameter | 48.7 Å |
| shell_rg | 19.43 Å |
| envelope_rg | 14.33 Å |
| shape_rg | 14.01 Å |
| total_rg | 15.33 Å |
| total_atoms | 917 |
| n_residues | 119 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 50.7 Å |
| rg_real | 15.43 Å |
| rg_real_error | 0.24 Å |
| i0_real | 3.1160e+06 |
| i0_real_error | 3.2460e+04 |
| rg_reciprocal | 15.43 Å |
| i0_reciprocal | 3116000.0000 |
| total_estimate | 0.8777 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 18.6 Å |
| skewness | 0.207 |
| kurtosis | -0.266 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 515600.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.818; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.952 |