9x6o
Crystal structure of Klebsiella oxytoca ribitol dehydrogenase in complex with NAD+
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9x6o |
| deposition_date | 2025-10-15 |
| last_revision | 2026-04-29 |
| title | Crystal structure of Klebsiella oxytoca ribitol dehydrogenase in complex with NAD+ |
| keywords | Rossmann fold, dehydrogenase, OXIDOREDUCTASE; OXIDOREDUCTASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 29.22 Å |
| rg_electron | 27.99 Å |
| i0 | 168071000.00 |
| molecular_weight | 104040.0 kDa |
| excluded_volume | 130880 ų |
| envelope_volume | 151840 ų |
| shell_volume | 43120 ų |
| envelope_diameter | 95.2 Å |
| shell_rg | 36.92 Å |
| envelope_rg | 28.09 Å |
| shape_rg | 27.98 Å |
| total_rg | 28.83 Å |
| total_atoms | 7311 |
| n_residues | 965 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 90.6 Å |
| rg_real | 29.06 Å |
| rg_real_error | 0.46 Å |
| i0_real | 1.6810e+08 |
| i0_real_error | 2.5310e+06 |
| rg_reciprocal | 29.13 Å |
| i0_reciprocal | 168100000.0000 |
| total_estimate | 0.9002 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 36.9 Å |
| skewness | 0.144 |
| kurtosis | -0.469 |
| angular_range | — – 0.2700 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 66760000.0000 |
| n_real_points | 55 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.918; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.980; Smooth: 0.966 |