9x6m
Crystal structure of Klebsiella oxytoca ribitol dehydrogenase in complex with D-allose
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9x6m |
| deposition_date | 2025-10-15 |
| last_revision | 2026-04-29 |
| title | Crystal structure of Klebsiella oxytoca ribitol dehydrogenase in complex with D-allose |
| keywords | Rossmann fold, dehydrogenase, OXIDOREDUCTASE; OXIDOREDUCTASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 29.67 Å |
| rg_electron | 28.46 Å |
| i0 | 157224000.00 |
| molecular_weight | 101710.0 kDa |
| excluded_volume | 128500 ų |
| envelope_volume | 152860 ų |
| shell_volume | 42841 ų |
| envelope_diameter | 108.9 Å |
| shell_rg | 37.18 Å |
| envelope_rg | 29.03 Å |
| shape_rg | 28.45 Å |
| total_rg | 29.28 Å |
| total_atoms | 14491 |
| n_residues | 967 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 100.6 Å |
| rg_real | 29.56 Å |
| rg_real_error | 0.58 Å |
| i0_real | 1.5720e+08 |
| i0_real_error | 2.3350e+06 |
| rg_reciprocal | 29.61 Å |
| i0_reciprocal | 157200000.0000 |
| total_estimate | 0.6567 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 36.0 Å |
| skewness | 0.259 |
| kurtosis | -0.326 |
| angular_range | — – 0.2650 Å−1 |
| current_alpha | 0.0001 |
| highest_alpha | 49620000.0000 |
| n_real_points | 54 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.794; Stabil: 1.000; Sysdev: 0.050; Positv: 1.000; Valcen: 1.000; Smooth: 0.999 |