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9y1x

Crystal structure of NRas-G12D in complex with GDP and IACS-56676

Method: X-RAY DIFFRACTION Dmax: 75.9 Å Quality: REASONABLE

SAXS Profile

SAXS profile for 9y1x

P(r) Distribution

P(r) distribution for 9y1x

1. Structure Basics

entry_id9y1x
deposition_date2025-08-31
titleCrystal structure of NRas-G12D in complex with GDP and IACS-56676
keywordsInhibitor, GTPase, HYDROLASE; HYDROLASE
methodX-RAY DIFFRACTION

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier22.02
rg_electron21.36
i054218700.00
molecular_weight37995.0 kDa
excluded_volume36547 ų
envelope_volume57738 ų
shell_volume22799 ų
envelope_diameter80.2
shell_rg27.86
envelope_rg21.54
shape_rg21.33
total_rg21.97
total_atoms2906
n_residues338
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax75.9
rg_real22.00
rg_real_error0.52
i0_real5.4220e+07
i0_real_error7.7010e+05
rg_reciprocal22.01
i0_reciprocal54220000.0000
total_estimate0.5916
solution_quality REASONABLE a REASONABLE solution
n_peaks2
r_peak_primary26.1
skewness0.377
kurtosis-0.248
angular_range— – 0.3600 −1
current_alpha0.0000
highest_alpha9215000.0000
n_real_points68
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.767; Stabil: 1.000; Sysdev: 0.145; Positv: 1.000; Valcen: 0.952; Smooth: 0.000

4. Crystallography & Experiment

5. Entities & Polymer Info (6)

6. Citations (1)

7. Files & Curves (10)