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9y1z

Crystal structure of NRas-G12D in complex with GDP and compound 5

Method: X-RAY DIFFRACTION Dmax: 73.1 Å Quality: GOOD

SAXS Profile

SAXS profile for 9y1z

P(r) Distribution

P(r) distribution for 9y1z

1. Structure Basics

entry_id9y1z
deposition_date2025-08-31
titleCrystal structure of NRas-G12D in complex with GDP and compound 5
keywordsInhibitor, GTPase, HYDROLASE; HYDROLASE
methodX-RAY DIFFRACTION

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier22.01
rg_electron21.39
i048362500.00
molecular_weight35512.0 kDa
excluded_volume33940 ų
envelope_volume54843 ų
shell_volume21774 ų
envelope_diameter78.2
shell_rg27.65
envelope_rg21.57
shape_rg21.39
total_rg21.96
total_atoms2674
n_residues329
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax73.1
rg_real22.01
rg_real_error0.56
i0_real4.8360e+07
i0_real_error6.9790e+05
rg_reciprocal22.02
i0_reciprocal48360000.0000
total_estimate0.8054
solution_quality GOOD a GOOD solution
n_peaks1
r_peak_primary72.0
skewness0.374
kurtosis-0.309
angular_range— – 0.3600 −1
current_alpha0.0000
highest_alpha7573000.0000
n_real_points68
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.834; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.964; Smooth: 0.000

4. Crystallography & Experiment

5. Entities & Polymer Info (6)

6. Citations (1)

7. Files & Curves (10)