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9y3w

Crystal structure of NRas-G12D in complex with GDP and compound 13

Method: X-RAY DIFFRACTION Dmax: 74.7 Å Quality: GOOD

SAXS Profile

SAXS profile for 9y3w

P(r) Distribution

P(r) distribution for 9y3w

1. Structure Basics

entry_id9y3w
deposition_date2025-09-02
titleCrystal structure of NRas-G12D in complex with GDP and compound 13
keywordsInhibitor, GTPase, HYDROLASE; HYDROLASE
methodX-RAY DIFFRACTION

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier22.07
rg_electron21.41
i054083500.00
molecular_weight37788.0 kDa
excluded_volume36190 ų
envelope_volume58069 ų
shell_volume22893 ų
envelope_diameter80.5
shell_rg27.95
envelope_rg21.55
shape_rg21.40
total_rg22.00
total_atoms2844
n_residues338
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax74.7
rg_real22.06
rg_real_error0.62
i0_real5.4080e+07
i0_real_error7.7700e+05
rg_reciprocal22.06
i0_reciprocal54080000.0000
total_estimate0.7956
solution_quality GOOD a GOOD solution
n_peaks2
r_peak_primary26.8
skewness0.379
kurtosis-0.247
angular_range— – 0.3600 −1
current_alpha0.0000
highest_alpha9835000.0000
n_real_points68
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.792; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.964; Smooth: 0.000

4. Crystallography & Experiment

5. Entities & Polymer Info (6)

6. Citations (1)

7. Files & Curves (10)