9y6t
Structure of Mycobacterium tuberculosis pyruvate dehydrogenase complex E2p core subunit DlaT in a hexamer state
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9y6t |
| deposition_date | 2025-09-09 |
| title | Structure of Mycobacterium tuberculosis pyruvate dehydrogenase complex E2p core subunit DlaT in a hexamer state |
| keywords | hexamer dihydrolipoamide acetyltransferase Mycobacterium tuberculosis pyruvate dehydrogenase complex, TRANSFERASE; TRANSFERASE |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 39.26 Å |
| rg_electron | 38.39 Å |
| i0 | 367607000.00 |
| molecular_weight | 155500.0 kDa |
| excluded_volume | 194590 ų |
| envelope_volume | 250750 ų |
| shell_volume | 53776 ų |
| envelope_diameter | 120.0 Å |
| shell_rg | 45.03 Å |
| envelope_rg | 37.86 Å |
| shape_rg | 38.40 Å |
| total_rg | 38.71 Å |
| total_atoms | 10962 |
| n_residues | 1446 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 123.8 Å |
| rg_real | 39.24 Å |
| rg_real_error | 0.88 Å |
| i0_real | 3.6760e+08 |
| i0_real_error | 5.4390e+06 |
| rg_reciprocal | 39.26 Å |
| i0_reciprocal | 367600000.0000 |
| total_estimate | 0.8268 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 40.2 Å |
| skewness | 0.253 |
| kurtosis | -0.724 |
| angular_range | — – 0.2000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 75220000.0000 |
| n_real_points | 41 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.917; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.994; Smooth: 0.000 |