9y8p
Cryo-EM structure of Thermotoga maritima encapsulin shell
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9y8p |
| deposition_date | 2025-09-11 |
| title | Cryo-EM structure of Thermotoga maritima encapsulin shell |
| keywords | ENCAPSULIN SHELL, VIRUS LIKE PARTICLE; VIRUS LIKE PARTICLE |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | — Å |
| rg_electron | 105.50 Å |
| i0 | 42521000000.00 |
| molecular_weight | 1827900.0 kDa |
| excluded_volume | 2313700 ų |
| envelope_volume | 6210100 ų |
| shell_volume | 501530 ų |
| envelope_diameter | 248.9 Å |
| shell_rg | 116.50 Å |
| envelope_rg | 88.89 Å |
| shape_rg | 105.50 Å |
| total_rg | 105.70 Å |
| total_atoms | 129180 |
| n_residues | 15900 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 249.0 Å |
| rg_real | 106.00 Å |
| rg_real_error | 0.22 Å |
| i0_real | 4.2560e+10 |
| i0_real_error | 6.3590e+08 |
| rg_reciprocal | 115.80 Å |
| i0_reciprocal | 43910000000.0000 |
| total_estimate | 0.8600 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 182.6 Å |
| skewness | -0.481 |
| kurtosis | -0.608 |
| angular_range | — – 0.0750 Å−1 |
| current_alpha | 1.2500 |
| highest_alpha | 8184000000000000.0000 |
| n_real_points | 16 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.788; Stabil: 0.973; Sysdev: 1.000; Positv: 1.000; Valcen: 0.898; Smooth: 0.000 |