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9yf8

N4 Full Virion Portal

Method: ELECTRON MICROSCOPY D_max: 219.7 Å Quality: GOOD

SAXS Profile

P(r) Distribution

P(r) distribution for 9yf8

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1. Structure Basics

entry_id	9yf8
deposition_date	2025-09-25
title	N4 Full Virion Portal
keywords	dodecamer, bacteriophage portal, VIRAL PROTEIN; VIRAL PROTEIN
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	68.86 Å
rg_electron	68.18 Å
i0	11952500000.00
molecular_weight	915000.0 kDa
excluded_volume	1140900 Å³
envelope_volume	1832000 Å³
shell_volume	215060 Å³
envelope_diameter	229.9 Å
shell_rg	77.56 Å
envelope_rg	65.71 Å
shape_rg	68.18 Å
total_rg	68.31 Å
total_atoms	64332
n_residues	8100
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	219.7 Å
rg_real	68.63 Å
rg_real_error	2.05 Å
i0_real	1.1950e+10
i0_real_error	2.3110e+08
rg_reciprocal	69.61 Å
i0_reciprocal	11970000000.0000
total_estimate	0.8624
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	95.5 Å
skewness	0.146
kurtosis	-0.314
angular_range	— – 0.1150 Å⁻¹
current_alpha	0.0000
highest_alpha	3733000000.0000
n_real_points	24
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.842; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.953; Smooth: 0.726

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4. Crystallography & Experiment

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5. Entities & Polymer Info (1)

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6. Citations (1)

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7. Files & Curves (10)