BCL11A ZF4-6 in Complex with a DNA Sequence Observed in the Human Globin Locus Containing Motif TGTCCA (20-mer)

entry_id	9yll
deposition_date	2025-10-08
title	BCL11A ZF4-6 in Complex with a DNA Sequence Observed in the Human Globin Locus Containing Motif TGTCCA (20-mer)
keywords	TRANSCRIPTION FACTOR, DNA BINDING, TRANSCRIPTION, TRANSCRIPTION-DNA COMPLEX, GLOBIN LOCUS, DNA BINDING PROTEIN; TRANSCRIPTION/DNA
method	X-RAY DIFFRACTION

rg_guinier	21.18 Å
rg_electron	21.02 Å
i0	16551500.00
molecular_weight	22085.0 kDa
excluded_volume	23759 ų
envelope_volume	33109 ų
shell_volume	14784 ų
envelope_diameter	79.2 Å
shell_rg	25.28 Å
envelope_rg	21.46 Å
shape_rg	20.99 Å
total_rg	21.55 Å
total_atoms	1485
n_residues	125
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	76.2 Å
rg_real	21.43 Å
rg_real_error	0.67 Å
i0_real	1.6550e+07
i0_real_error	2.2290e+05
rg_reciprocal	21.38 Å
i0_reciprocal	16550000.0000
total_estimate	0.7296
solution_quality	REASONABLE a REASONABLE solution
n_peaks	2
r_peak_primary	20.2 Å
skewness	0.587
kurtosis	-0.166
angular_range	— – 0.3750 Å−1
current_alpha	0.0000
highest_alpha	1422000.0000
n_real_points	69
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.648; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.537; Smooth: 0.000

Unit Cell

length_a	58.861 Å
length_b	58.861 Å
length_c	256.310 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

Symmetry

space_group	P 43 21 2
int_tables_number	96
crystal_system	tetragonal

Refinement

resolution	2.380 Å
resolution_low	34.900 Å
r_factor	0.2073
r_work	0.2053
r_free	0.2470

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/yl/9yll/pr_distribution.json
• pr_output /app/data/pr_computation/yl/9yll/9yll.pr.out
• pr_plot /app/data/visualization/pr_computation/yl/9yll/9yll_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/yl/9yll/9yll.dat
• saxs_fit /app/data/saxs_computation/yl/9yll/9yll.fit
• saxs_log /app/data/saxs_computation/yl/9yll/9yll.log
• saxs_plot /app/data/visualization/saxs_computation/yl/9yll/9yll_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/yl/9yll/9yll.fit
pddf	/app/data/pr_computation/yl/9yll/9yll.pr.out
profile	/app/data/saxs_computation/yl/9yll/9yll.dat