BCL11A ZF4-6 in Complex with a DNA Sequence Observed in the Human Globin Locus Containing Motif TGGCCA (12-mer)

entry_id	9yln
deposition_date	2025-10-08
title	BCL11A ZF4-6 in Complex with a DNA Sequence Observed in the Human Globin Locus Containing Motif TGGCCA (12-mer)
keywords	TRANSCRIPTION FACTOR, DNA BINDING, TRANSCRIPTION, TRANSCRIPTION-DNA COMPLEX, GLOBIN LOCUS, DNA BINDING PROTEIN; TRANSCRIPTION/DNA
method	X-RAY DIFFRACTION

rg_guinier	16.73 Å
rg_electron	16.46 Å
i0	10175700.00
molecular_weight	17675.0 kDa
excluded_volume	19454 ų
envelope_volume	24567 ų
shell_volume	13188 ų
envelope_diameter	59.9 Å
shell_rg	21.51 Å
envelope_rg	16.78 Å
shape_rg	16.42 Å
total_rg	17.22 Å
total_atoms	1192
n_residues	112
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	61.3 Å
rg_real	16.72 Å
rg_real_error	0.48 Å
i0_real	1.0180e+07
i0_real_error	1.2330e+05
rg_reciprocal	16.72 Å
i0_reciprocal	10180000.0000
total_estimate	0.8420
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	59.7 Å
skewness	0.362
kurtosis	-0.184
angular_range	— – 0.4750 Å−1
current_alpha	0.0000
highest_alpha	1291000.0000
n_real_points	78
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.679; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.909; Smooth: 0.996

Unit Cell

length_a	56.973 Å
length_b	56.973 Å
length_c	155.874 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

Symmetry

space_group	P 41 21 2
int_tables_number	92
crystal_system	tetragonal

Refinement

resolution	2.150 Å
resolution_low	31.840 Å
r_factor	0.2045
r_work	0.2024
r_free	0.2466

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/yl/9yln/pr_distribution.json
• pr_output /app/data/pr_computation/yl/9yln/9yln.pr.out
• pr_plot /app/data/visualization/pr_computation/yl/9yln/9yln_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/yl/9yln/9yln.dat
• saxs_fit /app/data/saxs_computation/yl/9yln/9yln.fit
• saxs_log /app/data/saxs_computation/yl/9yln/9yln.log
• saxs_plot /app/data/visualization/saxs_computation/yl/9yln/9yln_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/yl/9yln/9yln.fit
pddf	/app/data/pr_computation/yl/9yln/9yln.pr.out
profile	/app/data/saxs_computation/yl/9yln/9yln.dat