BCL11A ZF2-3 in Complex with a DNA Sequence Observed in the Human Globin Locus Containing Motif TGTCCA (C2221 Crystal Form)

entry_id	9ylp
deposition_date	2025-10-08
title	BCL11A ZF2-3 in Complex with a DNA Sequence Observed in the Human Globin Locus Containing Motif TGTCCA (C2221 Crystal Form)
keywords	TRANSCRIPTION FACTOR, DNA BINDING, TRANSCRIPTION, TRANSCRIPTION-DNA COMPLEX, GLOBIN LOCUS, DNA BINDING PROTEIN; TRANSCRIPTION/DNA
method	X-RAY DIFFRACTION

rg_guinier	15.32 Å
rg_electron	14.75 Å
i0	7187990.00
molecular_weight	14272.0 kDa
excluded_volume	15508 ų
envelope_volume	19790 ų
shell_volume	11805 ų
envelope_diameter	56.7 Å
shell_rg	19.90 Å
envelope_rg	15.07 Å
shape_rg	14.67 Å
total_rg	15.68 Å
total_atoms	954
n_residues	80
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	37.5 Å
rg_real	14.69 Å
rg_real_error	0.03 Å
i0_real	6.8840e+06
i0_real_error	4.6740e+04
rg_reciprocal	15.25 Å
i0_reciprocal	7188000.0000
total_estimate	0.6881
solution_quality	REASONABLE a REASONABLE solution
n_peaks	1
r_peak_primary	18.5 Å
skewness	0.050
kurtosis	-0.601
angular_range	— – 0.5000 Å−1
current_alpha	2.4340
highest_alpha	509400.0000
n_real_points	80
gnom_version	4.1.3
quality_criteria	AN1: 0.001; Oscil: 1.000; Stabil: 0.982; Sysdev: 0.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.000

Unit Cell

length_a	36.899 Å
length_b	69.554 Å
length_c	129.174 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

Symmetry

space_group	C 2 2 21
int_tables_number	20
crystal_system	orthorhombic

Refinement

resolution	2.040 Å
resolution_low	34.780 Å
r_factor	0.2113
r_work	0.2095
r_free	0.2447

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/yl/9ylp/pr_distribution.json
• pr_output /app/data/pr_computation/yl/9ylp/9ylp.pr.out
• pr_plot /app/data/visualization/pr_computation/yl/9ylp/9ylp_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/yl/9ylp/9ylp.dat
• saxs_fit /app/data/saxs_computation/yl/9ylp/9ylp.fit
• saxs_log /app/data/saxs_computation/yl/9ylp/9ylp.log
• saxs_plot /app/data/visualization/saxs_computation/yl/9ylp/9ylp_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/yl/9ylp/9ylp.fit
pddf	/app/data/pr_computation/yl/9ylp/9ylp.pr.out
profile	/app/data/saxs_computation/yl/9ylp/9ylp.dat