9yzw
Joint Xray/Neutron structure of Escherichia coli YajL at room temperature
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9yzw |
| deposition_date | 2025-10-30 |
| title | Joint Xray/Neutron structure of Escherichia coli YajL at room temperature |
| keywords | HYDROLASE, DJ-1 superfamily, Cysteine dependent enzyme; HYDROLASE |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 22.95 Å |
| rg_electron | 20.76 Å |
| i0 | 9894740.00 |
| molecular_weight | 46146.0 kDa |
| excluded_volume | 65805 ų |
| envelope_volume | 64175 ų |
| shell_volume | 24898 ų |
| envelope_diameter | 70.6 Å |
| shell_rg | 28.31 Å |
| envelope_rg | 21.40 Å |
| shape_rg | 20.66 Å |
| total_rg | 23.03 Å |
| total_atoms | 5880 |
| n_residues | 390 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 71.7 Å |
| rg_real | 22.86 Å |
| rg_real_error | 0.39 Å |
| i0_real | 9.8950e+06 |
| i0_real_error | 1.3150e+05 |
| rg_reciprocal | 22.88 Å |
| i0_reciprocal | 9895000.0000 |
| total_estimate | 0.8904 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 27.6 Å |
| skewness | 0.231 |
| kurtosis | -0.323 |
| angular_range | — – 0.3450 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 3104000.0000 |
| n_real_points | 66 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.869; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.977 |