9z0m
Human CD300c extracellular domain pH 7.5
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9z0m |
| deposition_date | 2025-11-02 |
| last_revision | 2025-11-19 |
| title | Human CD300c extracellular domain pH 7.5 |
| keywords | ;CD300c, IGV-like domain, lipid binding protein, myeloid receptor, CMRF-35-like molecule-6, CLM-6, CMRF-35, CMRF35-A1, IgSF16, IMMUNE SYSTEM ;; IMMUNE SYSTEM |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 14.65 Å |
| rg_electron | 13.69 Å |
| i0 | 3175820.00 |
| molecular_weight | 12155.0 kDa |
| excluded_volume | 15079 ų |
| envelope_volume | 17005 ų |
| shell_volume | 10883 ų |
| envelope_diameter | 55.2 Å |
| shell_rg | 19.11 Å |
| envelope_rg | 14.21 Å |
| shape_rg | 13.71 Å |
| total_rg | 14.79 Å |
| total_atoms | 855 |
| n_residues | 109 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 54.2 Å |
| rg_real | 14.61 Å |
| rg_real_error | 0.49 Å |
| i0_real | 3.1760e+06 |
| i0_real_error | 3.8700e+04 |
| rg_reciprocal | 14.61 Å |
| i0_reciprocal | 3176000.0000 |
| total_estimate | 0.7422 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 3 |
| r_peak_primary | 18.5 Å |
| skewness | 0.337 |
| kurtosis | -0.011 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 741100.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.577; Stabil: 0.997; Sysdev: 1.000; Positv: 1.000; Valcen: 0.923; Smooth: 0.000 |