9za1
cryoEM structure of COMMD-like protein S4Y171 octamer
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9za1 |
| deposition_date | 2025-11-18 |
| title | cryoEM structure of COMMD-like protein S4Y171 octamer |
| keywords | Commd-like, octamer, bacterial, Commd, Commander, UNKNOWN FUNCTION; UNKNOWN FUNCTION |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 43.44 Å |
| rg_electron | 42.69 Å |
| i0 | 438717000.00 |
| molecular_weight | 170120.0 kDa |
| excluded_volume | 213470 ų |
| envelope_volume | 336540 ų |
| shell_volume | 66652 ų |
| envelope_diameter | 133.6 Å |
| shell_rg | 47.39 Å |
| envelope_rg | 41.28 Å |
| shape_rg | 42.71 Å |
| total_rg | 42.90 Å |
| total_atoms | 24352 |
| n_residues | 1584 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 136.8 Å |
| rg_real | 43.18 Å |
| rg_real_error | 0.96 Å |
| i0_real | 4.3870e+08 |
| i0_real_error | 7.7190e+06 |
| rg_reciprocal | 43.44 Å |
| i0_reciprocal | 438800000.0000 |
| total_estimate | 0.7939 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 57.0 Å |
| skewness | 0.086 |
| kurtosis | -0.348 |
| angular_range | — – 0.1800 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 30740000.0000 |
| n_real_points | 37 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.782; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.970; Smooth: 0.000 |