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9zcd

Flavobacterium johnsoniae 30S ribosomal subunit.

Method: ELECTRON MICROSCOPY Dmax: 239.6 Å Quality: GOOD
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1. Protein Identity and Related Structures Protein Identity & Related Structures

30S ribosomal protein S1

Flavobacterium johnsoniae

UniProt A0A1M6TFV7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain A； UniProt 1–591 Not recorded 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name A0A1M6TFV7_FLAJO
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–591； UniProt 1–591

30S ribosomal protein S2

Flavobacterium johnsoniae

UniProt A5FJG9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain H； UniProt 1–254 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain H 1–254（254 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain H 1–254（254 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain H 1–254（254 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain H 1–254（254 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS2_FLAJ1
Isoform —
PDB entities 2
Chains and sequence ranges Author chain H； PDBConstruct 1–254； UniProt 1–254

30S ribosomal protein S3

Flavobacterium johnsoniae

UniProt A0A1J7CBX1

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain h； UniProt 1–252 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain h 1–252（252 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain h 1–252（252 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain h 1–252（252 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain h 1–252（252 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain h 1–252（252 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain h 1–252（252 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain h 1–252（252 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1J7CBX1_FLAJO
Isoform —
PDB entities 3
Chains and sequence ranges Author chain h； PDBConstruct 1–252； UniProt 1–252

30S ribosomal protein S4

Flavobacterium johnsoniae

UniProt A0A1B2U0J7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain i； UniProt 1–201 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain i 1–201（201 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain i 1–201（201 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain i 1–201（201 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain i 1–201（201 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain i 1–201（201 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain i 1–201（201 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain i 1–201（201 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1B2U0J7_FLAJO
Isoform —
PDB entities 4
Chains and sequence ranges Author chain i； PDBConstruct 1–201； UniProt 1–201

30S ribosomal protein S5

Flavobacterium johnsoniae

UniProt A0A1B2U0I9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain j； UniProt 1–173 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain j 1–173（173 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain j 1–173（173 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain j 1–173（173 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain j 1–173（173 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain j 1–173（173 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain j 1–173（173 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain j 1–173（173 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1B2U0I9_FLAJO
Isoform —
PDB entities 5
Chains and sequence ranges Author chain j； PDBConstruct 1–173； UniProt 1–173

30S ribosomal protein S6

Flavobacterium johnsoniae

UniProt A0A1J7BSW7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain k； UniProt 1–113 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain k 1–113（113 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain k 1–113（113 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain k 1–113（113 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain k 1–113（113 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain k 1–113（113 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain k 1–113（113 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain k 1–113（113 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1J7BSW7_FLAJO
Isoform —
PDB entities 6
Chains and sequence ranges Author chain k； PDBConstruct 1–113； UniProt 1–113

30S ribosomal protein S7

Flavobacterium johnsoniae

UniProt A0A1M5L9G3

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain l； UniProt 1–158 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain l 1–158（158 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain l 1–158（158 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain l 1–158（158 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain l 1–158（158 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain l 1–158（158 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain l 1–158（158 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain l 1–158（158 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1M5L9G3_FLAJO
Isoform —
PDB entities 7
Chains and sequence ranges Author chain l； PDBConstruct 1–158； UniProt 1–158

30S ribosomal protein S8

Flavobacterium johnsoniae

UniProt A0A1M5L889

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain m； UniProt 13–144 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain m 13–144（132 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain m 13–144（132 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain m 13–144（132 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain m 13–144（132 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain m 13–144（132 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain m 13–144（132 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain m 13–144（132 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1M5L889_FLAJO
Isoform —
PDB entities 8
Chains and sequence ranges Author chain m； PDBConstruct 1–132； UniProt 13–144

30S ribosomal protein S9

Flavobacterium johnsoniae

UniProt A0A1M6R974

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain n； UniProt 1–128 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain n 1–128（128 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain n 1–128（128 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain n 1–128（128 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain n 1–128（128 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain n 1–128（128 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain n 1–128（128 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain n 1–128（128 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1M6R974_FLAJO
Isoform —
PDB entities 9
Chains and sequence ranges Author chain n； PDBConstruct 1–128； UniProt 1–128

30S ribosomal protein S10

Flavobacterium johnsoniae

UniProt A0A1J7CP29

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain o； UniProt 1–101 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain o 1–101（101 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain o 1–101（101 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain o 1–101（101 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain o 1–101（101 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain o 1–101（101 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain o 1–101（101 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain o 1–101（101 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1J7CP29_FLAJO
Isoform —
PDB entities 10
Chains and sequence ranges Author chain o； PDBConstruct 1–101； UniProt 1–101

30S ribosomal protein S11

Flavobacterium johnsoniae

UniProt A0A1J7CBV3

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain p； UniProt 1–127 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain p 1–127（127 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain p 1–127（127 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain p 1–127（127 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain p 1–127（127 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain p 1–127（127 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain p 1–127（127 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain p 1–127（127 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1J7CBV3_FLAJO
Isoform —
PDB entities 11
Chains and sequence ranges Author chain p； PDBConstruct 1–127； UniProt 1–127

Small ribosomal subunit protein uS12

Flavobacterium johnsoniae

UniProt A0A1B2U0C6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain q； UniProt 1–127 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name A0A1B2U0C6_FLAJO
Isoform —
PDB entities 12
Chains and sequence ranges Author chain q； PDBConstruct 1–127； UniProt 1–127

30S ribosomal protein S13

Flavobacterium johnsoniae

UniProt P0A7T1

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain r； UniProt 1–114 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
4V5B Structure of PDF binding helix in complex with the ribosome. Deposited 2007-11-22 Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Insufficient information Heteromer；Protein × 50 PDB declaration: 53-meric
Chain BM 2–118（117 aa） Fragment：RESIDUES 2-118
Not recorded MG MAGNESIUM ION × 170 X-RAY DIFFRACTION
X-ray crystallization conditions pH 7.5；pH 7.5
Resolution 3.74 Å R-free 0.323
4V5B Structure of PDF binding helix in complex with the ribosome. Deposited 2007-11-22 Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 2 Insufficient information Heteromer；Protein × 49 PDB declaration: 52-meric
Chain not uniquely mapped Reference range not declared Fragment：RESIDUES 2-118
Not recorded MG MAGNESIUM ION × 173 X-RAY DIFFRACTION
X-ray crystallization conditions pH 7.5；pH 7.5
Resolution 3.74 Å R-free 0.323
5UZ4 The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly Deposited 2017-02-24 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain M 1–118（118 aa）
Not recorded ZN ZINC ION × 1 GGM 3'-O-(N-methylanthraniloyl)-beta:gamma-imidoguanosine-5'-triphosphate × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 5.80 Å
5WF0 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) Deposited 2017-07-11 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 59-meric
Chain m 2–116（115 aa）
Not recorded FME N-FORMYLMETHIONINE × 1 MG MAGNESIUM ION × 1480 K POTASSIUM ION × 5 PHE PHENYLALANINE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；5 second blot time, no wait time
Resolution 3.60 Å
5WFS 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) Deposited 2017-07-12 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 52 PDB declaration: 59-meric
Chain m 2–116（115 aa）
Not recorded FME N-FORMYLMETHIONINE × 1 MG MAGNESIUM ION × 1471 K POTASSIUM ION × 7 PHE PHENYLALANINE × 1 GTP GUANOSINE-5'-TRIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；5 second blot time, no wait time
Resolution 3.00 Å
6AWB Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state Deposited 2017-09-05 Different construct Different oligomeric state Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 26 PDB declaration: 27-meric
Chain P 2–115（114 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7；20 mM Tris-HCl, pH 7.0, 100 mM NH4Cl, 10 mM MgCl2, 0.5 mM EDTA, 6 mM BME
cryo-EM vitrification conditions Cryogen ETHANE；2.5 uL of 50 nM 30S and 150 nM RNAP was applied to the grid. After a 30 second incubation, the grid was blotted for 5 seconds at blotting power 8.
Resolution 6.70 Å
6AWC Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state Deposited 2017-09-05 Different construct Different oligomeric state Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 26 PDB declaration: 27-meric
Chain P 2–115（114 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7；20 mM Tris-HCl, pH 7.0, 100 mM NH4Cl, 10 mM MgCl2, 0.5 mM EDTA, 6 mM BME
cryo-EM vitrification conditions Cryogen ETHANE；2.5 uL of 50 nM 30S and 150 nM RNAP was applied to the grid. After a 30 second incubation, the grid was blotted for 5 seconds at blotting power 8.
Resolution 7.90 Å
6AWD Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex Deposited 2017-09-05 Different construct Different oligomeric state Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 25 PDB declaration: 26-meric
Chain P 2–115（114 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7；20 mM Tris-HCl, pH 7.0, 100 mM NH4Cl, 10 mM MgCl2, 0.5 mM EDTA, 6 mM BME
cryo-EM vitrification conditions Cryogen ETHANE；2.5 uL of 50 nM 30S and 150 nM RNAP was applied to the grid. After a 30 second incubation, the grid was blotted for 5 seconds at blotting power 8.
Resolution 8.10 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain r 1–114（114 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain r 1–114（114 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain r 1–114（114 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain r 1–114（114 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

11 other PDB entries and 12 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS13_ECO57
Isoform —
PDB entities 13
Chains and sequence ranges Author chain r； PDBConstruct 1–114； UniProt 1–114

30S ribosomal protein S14

Flavobacterium johnsoniae

UniProt A0A1B2U0Q7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain s； UniProt 1–89 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain s 1–89（89 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain s 1–89（89 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain s 1–89（89 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain s 1–89（89 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain s 1–89（89 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain s 1–89（89 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain s 1–89（89 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1B2U0Q7_FLAJO
Isoform —
PDB entities 14
Chains and sequence ranges Author chain s； PDBConstruct 1–89； UniProt 1–89

30S ribosomal protein S15

Flavobacterium johnsoniae

UniProt A0A1M6QTP8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain t； UniProt 1–88 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain t 1–88（88 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain t 1–88（88 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain t 1–88（88 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain t 1–88（88 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain t 1–88（88 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain t 1–88（88 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain t 1–88（88 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1M6QTP8_FLAJO
Isoform —
PDB entities 15
Chains and sequence ranges Author chain t； PDBConstruct 1–88； UniProt 1–88

Small ribosomal subunit protein bS16

Flavobacterium johnsoniae

UniProt A0A1M6QGN9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain u； UniProt 1–188 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain u 1–188（188 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain u 1–188（188 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain u 1–188（188 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain u 1–188（188 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain u 1–188（188 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain u 1–188（188 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain u 1–188（188 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1M6QGN9_FLAJO
Isoform —
PDB entities 16
Chains and sequence ranges Author chain u； PDBConstruct 1–188； UniProt 1–188

30S ribosomal protein S17

Flavobacterium johnsoniae

UniProt A0A1M5L8M4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain v； UniProt 1–86 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain v 1–86（86 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain v 1–86（86 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain v 1–86（86 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain v 1–86（86 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain v 1–86（86 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain v 1–86（86 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain v 1–86（86 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1M5L8M4_FLAJO
Isoform —
PDB entities 17
Chains and sequence ranges Author chain v； PDBConstruct 1–86； UniProt 1–86

30S ribosomal protein S18

Flavobacterium johnsoniae

UniProt A0A1B2U6N1

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain w； UniProt 1–98 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain w 1–98（98 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain w 1–98（98 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain w 1–98（98 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain w 1–98（98 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain w 1–98（98 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain w 1–98（98 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain w 1–98（98 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1B2U6N1_FLAJO
Isoform —
PDB entities 18
Chains and sequence ranges Author chain w； PDBConstruct 1–98； UniProt 1–98

30S ribosomal protein S19

Flavobacterium johnsoniae

UniProt A0A1M5L8S8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain x； UniProt 1–92 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain x 1–92（92 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain x 1–92（92 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain x 1–92（92 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain x 1–92（92 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain x 1–92（92 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain x 1–92（92 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain x 1–92（92 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1M5L8S8_FLAJO
Isoform —
PDB entities 19
Chains and sequence ranges Author chain x； PDBConstruct 1–92； UniProt 1–92

30S ribosomal protein S20

Flavobacterium johnsoniae

UniProt A0A1B2U1X2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain y； UniProt 1–83 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S21 × 1 （A0A1J7CKJ9） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain y 1–83（83 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain y 1–83（83 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OYV Flavobacterium johnsoniae 30S ribosomal subunit, ZAM64 mutant. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 18 PDB declaration: nonadecameric
Chain y 1–83（83 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain y 1–83（83 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain y 1–83（83 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZZ Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 55-meric
Chain y 1–83（83 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.50 Å
9P0E Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. Deposited 2025-06-06 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 49 PDB declaration: 54-meric
Chain y 1–83（83 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1B2U1X2_FLAJO
Isoform —
PDB entities 20
Chains and sequence ranges Author chain y； PDBConstruct 1–83； UniProt 1–83

30S ribosomal protein S21

Flavobacterium johnsoniae

UniProt A0A1J7CKJ9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 21 RNA 1 PDB declaration: 22-meric（22） Consistent with all polymer counts Chain z； UniProt 1–64 Not recorded 30S ribosomal protein S1 × 1 （A0A1M6TFV7） 30S ribosomal protein S2 × 1 （A5FJG9） 30S ribosomal protein S3 × 1 （A0A1J7CBX1） 30S ribosomal protein S4 × 1 （A0A1B2U0J7） 30S ribosomal protein S5 × 1 （A0A1B2U0I9） 30S ribosomal protein S6 × 1 （A0A1J7BSW7） 30S ribosomal protein S7 × 1 （A0A1M5L9G3） 30S ribosomal protein S8 × 1 （A0A1M5L889） 30S ribosomal protein S9 × 1 （A0A1M6R974） 30S ribosomal protein S10 × 1 （A0A1J7CP29） 30S ribosomal protein S11 × 1 （A0A1J7CBV3） Small ribosomal subunit protein uS12 × 1 （A0A1B2U0C6） 30S ribosomal protein S13 × 1 （P0A7T1） 30S ribosomal protein S14 × 1 （A0A1B2U0Q7） 30S ribosomal protein S15 × 1 （A0A1M6QTP8） Small ribosomal subunit protein bS16 × 1 （A0A1M6QGN9） 30S ribosomal protein S17 × 1 （A0A1M5L8M4） 30S ribosomal protein S18 × 1 （A0A1B2U6N1） 30S ribosomal protein S19 × 1 （A0A1M5L8S8） 30S ribosomal protein S20 × 1 （A0A1B2U1X2） 16S rRNA × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.4 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.70 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9ZCD Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7JIL 70S ribosome Flavobacterium johnsoniae Deposited 2020-07-23 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 50 PDB declaration: 53-meric
Chain z 1–64（64 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9OY8 Flavobacterium johnsoniae 30S ribosomal subunit. Deposited 2025-06-04 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 20 PDB declaration: 21-meric
Chain z 1–64（64 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å
9OZ9 Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. Deposited 2025-06-05 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain z 1–64（64 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.60 Å
9OZN Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. Deposited 2025-06-05 Different oligomeric state Assembly 1 Protein–RNA Heteromer；Protein × 51 PDB declaration: 56-meric
Chain z 1–64（64 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.70 Å

4 other PDB entries and 4 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name A0A1J7CKJ9_FLAJO
Isoform —
PDB entities 21
Chains and sequence ranges Author chain z； PDBConstruct 1–64； UniProt 1–64

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 9zcd

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 9zcd
Download Download
▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id9zcd
Deposition date deposition_date2025-11-23
Structure title titleFlavobacterium johnsoniae 30S ribosomal subunit.
Keywords keywordsRibosome, 30S; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
▼

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier66.52 Å
Radius of gyration Rg (electron density) rg_electron67.06 Å
Forward intensity I(0) i016988300000.00
Molecular weight molecular_weight738950.0 kDa
Excluded volume excluded_volume773460 ų
Envelope volume envelope_volume1324300 ų
Hydration-shell volume shell_volume162820 ų
Envelope diameter envelope_diameter231.4 Å
Shell Rg shell_rg68.11 Å
Envelope Rg envelope_rg65.88 Å
Shape Rg shape_rg67.05 Å
Total Rg total_rg67.07 Å
Total atoms total_atoms49917
Residues n_residues3902
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 Å−1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3
▼

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax239.6 Å
Rg (real space) rg_real66.70 Å
Rg uncertainty (real space) rg_real_error2.53 Å
I(0) (real space) i0_real1.6990e+10
I(0) uncertainty (real space) i0_real_error3.5290e+08
Rg (reciprocal space) rg_reciprocal66.32 Å
I(0) (reciprocal space) i0_reciprocal16980000000.0000
Solution quality estimate total_estimate0.8465
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary69.9 Å
Skewness Skewness skewness0.408
Kurtosis Kurtosis kurtosis-0.326
Angular range angular_range— – 0.1200 Å−1
Current regularization parameter α current_alpha0.0001
Highest regularization parameter α highest_alpha1724000000.0000
Real-space data points n_real_points25
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.749; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.756
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5. Crystallography and Experiment 5. Crystallography & Experiment

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6. Entities and Polymers Entities & Polymers (22)

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8. Citations (1)

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9. Files and Curves (10)